Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01559Q495D7 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
LINC01559Q495D7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01559Q495D7 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LINC01559Q495D7 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC01559Q495D7 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01559Q495D7 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
LINC01559Q495D7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01559Q495D7 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01559Q495D7 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01559Q495D7 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01559Q495D7 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
LINC01559Q495D7 GXYLT1P3-201ENST00000453058 1193 ntBASIC14.32□□□□□ -0.12
LINC01559Q495D7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC14.32□□□□□ -0.12
LINC01559Q495D7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC14.32□□□□□ -0.12
LINC01559Q495D7 SPI1-203ENST00000533030 661 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01559Q495D7 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01559Q495D7 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01559Q495D7 DBI-210ENST00000542275 757 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC01559Q495D7 AC069236.1-201ENST00000604339 616 ntBASIC14.32□□□□□ -0.12
LINC01559Q495D7 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC01559Q495D7 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01559Q495D7 USP39-202ENST00000409025 1946 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC01559Q495D7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.32□□□□□ -0.12
LINC01559Q495D7 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01559Q495D7 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01559Q495D7 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01559Q495D7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01559Q495D7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01559Q495D7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01559Q495D7 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.32□□□□□ -0.12
LINC01559Q495D7 AL390961.4-201ENST00000623958 2535 ntBASIC14.32□□□□□ -0.12
LINC01559Q495D7 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01559Q495D7 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
LINC01559Q495D7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01559Q495D7 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.31□□□□□ -0.12
LINC01559Q495D7 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01559Q495D7 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01559Q495D7 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LINC01559Q495D7 AC104581.1-202ENST00000635932 2618 ntBASIC14.31□□□□□ -0.12
LINC01559Q495D7 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01559Q495D7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01559Q495D7 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01559Q495D7 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
LINC01559Q495D7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01559Q495D7 AR-207ENST00000612010 3896 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01559Q495D7 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01559Q495D7 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01559Q495D7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01559Q495D7 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01559Q495D7 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01559Q495D7 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01559Q495D7 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01559Q495D7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01559Q495D7 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.31□□□□□ -0.12
LINC01559Q495D7 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01559Q495D7 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01559Q495D7 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01559Q495D7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01559Q495D7 AC007613.1-201ENST00000572811 2597 ntBASIC14.31□□□□□ -0.12
LINC01559Q495D7 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
LINC01559Q495D7 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
LINC01559Q495D7 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01559Q495D7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01559Q495D7 WIZP1-201ENST00000531444 2299 ntBASIC14.31□□□□□ -0.12
LINC01559Q495D7 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01559Q495D7 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01559Q495D7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01559Q495D7 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01559Q495D7 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01559Q495D7 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.31□□□□□ -0.12
LINC01559Q495D7 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LINC01559Q495D7 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LINC01559Q495D7 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC14.31□□□□□ -0.12
LINC01559Q495D7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC14.31□□□□□ -0.12
LINC01559Q495D7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01559Q495D7 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01559Q495D7 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01559Q495D7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
LINC01559Q495D7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LINC01559Q495D7 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LINC01559Q495D7 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
LINC01559Q495D7 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01559Q495D7 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01559Q495D7 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01559Q495D7 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC01559Q495D7 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01559Q495D7 STX7-201ENST00000367937 1090 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC01559Q495D7 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01559Q495D7 AL109935.1-201ENST00000413249 473 ntTSL 3 BASIC14.3□□□□□ -0.12
LINC01559Q495D7 CNN2P6-201ENST00000439038 900 ntBASIC14.3□□□□□ -0.12
LINC01559Q495D7 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01559Q495D7 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC14.3□□□□□ -0.12
LINC01559Q495D7 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01559Q495D7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC14.3□□□□□ -0.12
LINC01559Q495D7 NTF6G-201ENST00000591094 616 ntBASIC14.3□□□□□ -0.12
LINC01559Q495D7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LINC01559Q495D7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC14.3□□□□□ -0.12
LINC01559Q495D7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
LINC01559Q495D7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms