Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 KRT8P9-201ENST00000558927 1449 ntBASIC15.01□□□□□ -0.01
CFHR3Q02985 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC15.01□□□□□ -0.01
CFHR3Q02985 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CFHR3Q02985 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CFHR3Q02985 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CFHR3Q02985 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
CFHR3Q02985 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CFHR3Q02985 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CFHR3Q02985 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.01□□□□□ -0.01
CFHR3Q02985 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CFHR3Q02985 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CFHR3Q02985 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CFHR3Q02985 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC15.01□□□□□ -0.01
CFHR3Q02985 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CFHR3Q02985 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CFHR3Q02985 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC15.01□□□□□ -0.01
CFHR3Q02985 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
CFHR3Q02985 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.01□□□□□ -0.01
CFHR3Q02985 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CFHR3Q02985 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC15.01□□□□□ -0.01
CFHR3Q02985 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC15.01□□□□□ -0.01
CFHR3Q02985 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC15.01□□□□□ -0.01
CFHR3Q02985 AC012306.2-201ENST00000609350 630 ntBASIC15.01□□□□□ -0.01
CFHR3Q02985 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.01□□□□□ -0.01
CFHR3Q02985 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.01□□□□□ -0.01
CFHR3Q02985 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CFHR3Q02985 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CFHR3Q02985 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CFHR3Q02985 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CFHR3Q02985 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC15.01□□□□□ -0.01
CFHR3Q02985 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CFHR3Q02985 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CFHR3Q02985 KRT8P11-201ENST00000409686 1436 ntBASIC15□□□□□ -0.01
CFHR3Q02985 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CFHR3Q02985 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CFHR3Q02985 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15□□□□□ -0.01
CFHR3Q02985 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC15□□□□□ -0.01
CFHR3Q02985 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC15□□□□□ -0.01
CFHR3Q02985 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC15□□□□□ -0.01
CFHR3Q02985 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC15□□□□□ -0.01
CFHR3Q02985 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15□□□□□ -0.01
CFHR3Q02985 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
CFHR3Q02985 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15□□□□□ -0.01
CFHR3Q02985 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC15□□□□□ -0.01
CFHR3Q02985 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15□□□□□ -0.01
CFHR3Q02985 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15□□□□□ -0.01
CFHR3Q02985 MFAP1P1-201ENST00000442257 1255 ntBASIC15□□□□□ -0.01
CFHR3Q02985 FDX2-206ENST00000492239 773 ntTSL 2 BASIC15□□□□□ -0.01
CFHR3Q02985 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15□□□□□ -0.01
CFHR3Q02985 PRSS44-201ENST00000515154 1146 ntBASIC15□□□□□ -0.01
CFHR3Q02985 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15□□□□□ -0.01
CFHR3Q02985 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
CFHR3Q02985 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15□□□□□ -0.01
CFHR3Q02985 CKBP1-201ENST00000565489 1086 ntBASIC15□□□□□ -0.01
CFHR3Q02985 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC15□□□□□ -0.01
CFHR3Q02985 SLC25A1P4-201ENST00000567977 778 ntBASIC15□□□□□ -0.01
CFHR3Q02985 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC15□□□□□ -0.01
CFHR3Q02985 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC15□□□□□ -0.01
CFHR3Q02985 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC15□□□□□ -0.01
CFHR3Q02985 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CFHR3Q02985 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC15□□□□□ -0.01
CFHR3Q02985 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CFHR3Q02985 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC15□□□□□ -0.01
CFHR3Q02985 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CFHR3Q02985 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
CFHR3Q02985 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
CFHR3Q02985 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC15□□□□□ -0.01
CFHR3Q02985 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15□□□□□ -0.01
CFHR3Q02985 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
CFHR3Q02985 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC15□□□□□ -0.01
CFHR3Q02985 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CFHR3Q02985 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CFHR3Q02985 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CFHR3Q02985 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CFHR3Q02985 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
CFHR3Q02985 CRYGFP-201ENST00000418459 633 ntBASIC14.99□□□□□ -0.01
CFHR3Q02985 TSPY21P-201ENST00000433481 731 ntBASIC14.99□□□□□ -0.01
CFHR3Q02985 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CFHR3Q02985 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
CFHR3Q02985 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.99□□□□□ -0.01
CFHR3Q02985 AC097493.4-201ENST00000641197 219 ntBASIC14.99□□□□□ -0.01
CFHR3Q02985 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CFHR3Q02985 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CFHR3Q02985 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CFHR3Q02985 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CFHR3Q02985 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
CFHR3Q02985 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CFHR3Q02985 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CFHR3Q02985 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
CFHR3Q02985 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
CFHR3Q02985 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
CFHR3Q02985 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC14.98□□□□□ -0.01
CFHR3Q02985 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.98□□□□□ -0.01
CFHR3Q02985 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
CFHR3Q02985 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC14.98□□□□□ -0.01
CFHR3Q02985 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
CFHR3Q02985 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.98□□□□□ -0.01
CFHR3Q02985 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.98□□□□□ -0.01
CFHR3Q02985 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.98□□□□□ -0.01
CFHR3Q02985 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC14.98□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms