Protein–RNA interactions for Protein: Q02539

HIST1H1A, Histone H1.1, humanhuman

Predicted RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H1AQ02539 AL049812.1-201ENST00000432563 2267 ntBASIC14.68□□□□□ -0.06
HIST1H1AQ02539 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
HIST1H1AQ02539 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 LINC01465-201ENST00000408887 1940 ntBASIC14.67□□□□□ -0.06
HIST1H1AQ02539 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
HIST1H1AQ02539 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 RER1-204ENST00000378518 522 ntTSL 3 BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 GGT1-206ENST00000404223 952 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
HIST1H1AQ02539 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 AC116351.2-201ENST00000606540 1585 ntBASIC14.65□□□□□ -0.06
HIST1H1AQ02539 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 AC079598.2-202ENST00000546624 1451 ntBASIC14.65□□□□□ -0.06
HIST1H1AQ02539 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
HIST1H1AQ02539 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms