Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
VSX2P58304 KRT8P41-201ENST00000533985 1514 ntBASIC18.37■□□□□ 0.53
VSX2P58304 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.37■□□□□ 0.53
VSX2P58304 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.37■□□□□ 0.53
VSX2P58304 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VSX2P58304 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VSX2P58304 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
VSX2P58304 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.37■□□□□ 0.53
VSX2P58304 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
VSX2P58304 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VSX2P58304 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
VSX2P58304 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VSX2P58304 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
VSX2P58304 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.36■□□□□ 0.53
VSX2P58304 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VSX2P58304 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.36■□□□□ 0.53
VSX2P58304 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VSX2P58304 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
VSX2P58304 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VSX2P58304 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VSX2P58304 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
VSX2P58304 AC087499.1-201ENST00000418141 1075 ntBASIC18.36■□□□□ 0.53
VSX2P58304 CRYGFP-201ENST00000418459 633 ntBASIC18.36■□□□□ 0.53
VSX2P58304 SDHAP1-207ENST00000440850 2000 ntBASIC18.36■□□□□ 0.53
VSX2P58304 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC18.36■□□□□ 0.53
VSX2P58304 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
VSX2P58304 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.36■□□□□ 0.53
VSX2P58304 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.36■□□□□ 0.53
VSX2P58304 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
VSX2P58304 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.36■□□□□ 0.53
VSX2P58304 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.36■□□□□ 0.53
VSX2P58304 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC18.36■□□□□ 0.53
VSX2P58304 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.36■□□□□ 0.53
VSX2P58304 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.36■□□□□ 0.53
VSX2P58304 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.36■□□□□ 0.53
VSX2P58304 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.36■□□□□ 0.53
VSX2P58304 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
VSX2P58304 AP000692.2-201ENST00000608391 879 ntBASIC18.36■□□□□ 0.53
VSX2P58304 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.36■□□□□ 0.53
VSX2P58304 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.36■□□□□ 0.53
VSX2P58304 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
VSX2P58304 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.36■□□□□ 0.53
VSX2P58304 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VSX2P58304 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSX2P58304 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSX2P58304 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSX2P58304 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSX2P58304 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.35■□□□□ 0.53
VSX2P58304 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSX2P58304 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
VSX2P58304 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.35■□□□□ 0.53
VSX2P58304 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSX2P58304 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSX2P58304 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC18.35■□□□□ 0.53
VSX2P58304 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
VSX2P58304 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSX2P58304 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSX2P58304 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSX2P58304 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSX2P58304 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSX2P58304 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC18.35■□□□□ 0.53
VSX2P58304 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VSX2P58304 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
VSX2P58304 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.35■□□□□ 0.53
VSX2P58304 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.35■□□□□ 0.53
VSX2P58304 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.35■□□□□ 0.53
VSX2P58304 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.35■□□□□ 0.53
VSX2P58304 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.35■□□□□ 0.53
VSX2P58304 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.35■□□□□ 0.53
VSX2P58304 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
VSX2P58304 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.35■□□□□ 0.53
VSX2P58304 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSX2P58304 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSX2P58304 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
VSX2P58304 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VSX2P58304 KRT8P9-201ENST00000558927 1449 ntBASIC18.34■□□□□ 0.53
VSX2P58304 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
VSX2P58304 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
VSX2P58304 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.34■□□□□ 0.53
VSX2P58304 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VSX2P58304 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VSX2P58304 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VSX2P58304 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
VSX2P58304 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.34■□□□□ 0.53
VSX2P58304 FITM1-202ENST00000559294 800 ntBASIC18.34■□□□□ 0.53
VSX2P58304 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
VSX2P58304 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
VSX2P58304 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VSX2P58304 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
VSX2P58304 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.34■□□□□ 0.53
VSX2P58304 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.34■□□□□ 0.53
VSX2P58304 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VSX2P58304 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VSX2P58304 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
VSX2P58304 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
VSX2P58304 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.34■□□□□ 0.53
VSX2P58304 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.34■□□□□ 0.53
VSX2P58304 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.34■□□□□ 0.53
VSX2P58304 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
VSX2P58304 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms