Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CMC4P56277 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
CMC4P56277 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CMC4P56277 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC14.32□□□□□ -0.12
CMC4P56277 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC14.32□□□□□ -0.12
CMC4P56277 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC14.32□□□□□ -0.12
CMC4P56277 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC14.32□□□□□ -0.12
CMC4P56277 SNORA78-201ENST00000459373 127 ntBASIC14.32□□□□□ -0.12
CMC4P56277 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
CMC4P56277 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC14.32□□□□□ -0.12
CMC4P56277 AP003071.4-201ENST00000562276 1284 ntBASIC14.32□□□□□ -0.12
CMC4P56277 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.32□□□□□ -0.12
CMC4P56277 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC14.32□□□□□ -0.12
CMC4P56277 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC14.32□□□□□ -0.12
CMC4P56277 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
CMC4P56277 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
CMC4P56277 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CMC4P56277 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CMC4P56277 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
CMC4P56277 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CMC4P56277 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
CMC4P56277 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC14.31□□□□□ -0.12
CMC4P56277 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMC4P56277 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
CMC4P56277 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMC4P56277 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC14.31□□□□□ -0.12
CMC4P56277 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMC4P56277 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMC4P56277 RCC2P6-201ENST00000526625 1557 ntBASIC14.31□□□□□ -0.12
CMC4P56277 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CMC4P56277 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMC4P56277 ME2-218ENST00000640965 2476 ntTSL 5 BASIC14.31□□□□□ -0.12
CMC4P56277 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CMC4P56277 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CMC4P56277 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.31□□□□□ -0.12
CMC4P56277 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMC4P56277 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMC4P56277 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
CMC4P56277 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMC4P56277 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.31□□□□□ -0.12
CMC4P56277 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.31□□□□□ -0.12
CMC4P56277 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC14.31□□□□□ -0.12
CMC4P56277 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.31□□□□□ -0.12
CMC4P56277 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.31□□□□□ -0.12
CMC4P56277 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
CMC4P56277 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CMC4P56277 CYGB-204ENST00000589342 815 ntTSL 3 BASIC14.31□□□□□ -0.12
CMC4P56277 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
CMC4P56277 AP000692.2-201ENST00000608391 879 ntBASIC14.31□□□□□ -0.12
CMC4P56277 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMC4P56277 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CMC4P56277 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMC4P56277 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMC4P56277 OR6D1P-202ENST00000641007 5290 ntBASIC14.31□□□□□ -0.12
CMC4P56277 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC14.31□□□□□ -0.12
CMC4P56277 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC14.31□□□□□ -0.12
CMC4P56277 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CMC4P56277 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC14.31□□□□□ -0.12
CMC4P56277 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMC4P56277 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMC4P56277 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CMC4P56277 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMC4P56277 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMC4P56277 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC14.3□□□□□ -0.12
CMC4P56277 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC14.3□□□□□ -0.12
CMC4P56277 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CMC4P56277 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMC4P56277 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMC4P56277 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CMC4P56277 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMC4P56277 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
CMC4P56277 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC14.3□□□□□ -0.12
CMC4P56277 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMC4P56277 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMC4P56277 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CMC4P56277 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CMC4P56277 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CMC4P56277 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CMC4P56277 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CMC4P56277 B3GAT3P1-201ENST00000471720 806 ntBASIC14.3□□□□□ -0.12
CMC4P56277 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CMC4P56277 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC14.3□□□□□ -0.12
CMC4P56277 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.3□□□□□ -0.12
CMC4P56277 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMC4P56277 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.3□□□□□ -0.12
CMC4P56277 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.3□□□□□ -0.12
CMC4P56277 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CMC4P56277 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC14.3□□□□□ -0.12
CMC4P56277 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMC4P56277 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMC4P56277 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
CMC4P56277 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMC4P56277 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC14.3□□□□□ -0.12
CMC4P56277 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMC4P56277 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMC4P56277 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CMC4P56277 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CMC4P56277 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
CMC4P56277 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
CMC4P56277 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms