Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC17.88■□□□□ 0.45
CDH12P55289 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.88■□□□□ 0.45
CDH12P55289 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.88■□□□□ 0.45
CDH12P55289 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.88■□□□□ 0.45
CDH12P55289 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH12P55289 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH12P55289 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH12P55289 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
CDH12P55289 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH12P55289 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
CDH12P55289 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH12P55289 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH12P55289 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC17.88■□□□□ 0.45
CDH12P55289 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH12P55289 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH12P55289 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH12P55289 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH12P55289 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CDH12P55289 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH12P55289 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH12P55289 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH12P55289 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH12P55289 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH12P55289 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH12P55289 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CDH12P55289 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH12P55289 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CDH12P55289 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CDH12P55289 AC009113.1-201ENST00000570267 2443 ntBASIC17.87■□□□□ 0.45
CDH12P55289 AC124283.5-201ENST00000624661 1809 ntBASIC17.87■□□□□ 0.45
CDH12P55289 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH12P55289 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH12P55289 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH12P55289 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.87■□□□□ 0.45
CDH12P55289 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.87■□□□□ 0.45
CDH12P55289 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC17.87■□□□□ 0.45
CDH12P55289 GATS-209ENST00000454084 1030 ntTSL 3 BASIC17.87■□□□□ 0.45
CDH12P55289 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC17.87■□□□□ 0.45
CDH12P55289 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.87■□□□□ 0.45
CDH12P55289 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH12P55289 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.87■□□□□ 0.45
CDH12P55289 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.87■□□□□ 0.45
CDH12P55289 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH12P55289 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC17.87■□□□□ 0.45
CDH12P55289 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.87■□□□□ 0.45
CDH12P55289 MYC-209ENST00000641252 345 ntBASIC17.87■□□□□ 0.45
CDH12P55289 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH12P55289 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH12P55289 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH12P55289 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CDH12P55289 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.87■□□□□ 0.45
CDH12P55289 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH12P55289 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH12P55289 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH12P55289 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH12P55289 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.87■□□□□ 0.45
CDH12P55289 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH12P55289 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CDH12P55289 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CDH12P55289 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH12P55289 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CDH12P55289 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH12P55289 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.86■□□□□ 0.45
CDH12P55289 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH12P55289 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CDH12P55289 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH12P55289 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.86■□□□□ 0.45
CDH12P55289 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH12P55289 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH12P55289 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH12P55289 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH12P55289 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH12P55289 AC097658.1-201ENST00000475555 843 ntBASIC17.86■□□□□ 0.45
CDH12P55289 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH12P55289 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH12P55289 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.86■□□□□ 0.45
CDH12P55289 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH12P55289 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH12P55289 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH12P55289 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH12P55289 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH12P55289 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH12P55289 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH12P55289 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CDH12P55289 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.86■□□□□ 0.45
CDH12P55289 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CDH12P55289 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CDH12P55289 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH12P55289 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CDH12P55289 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH12P55289 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH12P55289 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH12P55289 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH12P55289 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH12P55289 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CDH12P55289 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.85■□□□□ 0.45
CDH12P55289 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CDH12P55289 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CDH12P55289 RPS2P52-201ENST00000469610 820 ntBASIC17.85■□□□□ 0.45
CDH12P55289 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms