Protein–RNA interactions for Protein: P54829

PTPN5, Tyrosine-protein phosphatase non-receptor type 5, humanhuman

Predictions only

Length 565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN5P54829 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN5P54829 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN5P54829 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PTPN5P54829 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
PTPN5P54829 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.77
PTPN5P54829 MFAP1P1-201ENST00000442257 1255 ntBASIC19.83■□□□□ 0.77
PTPN5P54829 KRT18P38-201ENST00000449496 1282 ntBASIC19.83■□□□□ 0.77
PTPN5P54829 AC009078.2-202ENST00000463353 338 ntBASIC19.83■□□□□ 0.77
PTPN5P54829 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.83■□□□□ 0.77
PTPN5P54829 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
PTPN5P54829 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTPN5P54829 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
PTPN5P54829 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTPN5P54829 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
PTPN5P54829 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.83■□□□□ 0.76
PTPN5P54829 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC19.82■□□□□ 0.76
PTPN5P54829 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
PTPN5P54829 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN5P54829 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN5P54829 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN5P54829 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.82■□□□□ 0.76
PTPN5P54829 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPN5P54829 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN5P54829 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN5P54829 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN5P54829 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.82■□□□□ 0.76
PTPN5P54829 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
PTPN5P54829 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.82■□□□□ 0.76
PTPN5P54829 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPN5P54829 AC092329.2-201ENST00000598402 547 ntBASIC19.82■□□□□ 0.76
PTPN5P54829 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN5P54829 AC092338.2-201ENST00000568827 1415 ntBASIC19.82■□□□□ 0.76
PTPN5P54829 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPN5P54829 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN5P54829 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN5P54829 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.82■□□□□ 0.76
PTPN5P54829 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PTPN5P54829 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.82■□□□□ 0.76
PTPN5P54829 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
PTPN5P54829 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN5P54829 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.81■□□□□ 0.76
PTPN5P54829 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN5P54829 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN5P54829 STK25-204ENST00000405585 1643 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN5P54829 TCF3P1-201ENST00000423021 1937 ntBASIC19.81■□□□□ 0.76
PTPN5P54829 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.81■□□□□ 0.76
PTPN5P54829 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN5P54829 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
PTPN5P54829 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN5P54829 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN5P54829 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN5P54829 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.81■□□□□ 0.76
PTPN5P54829 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN5P54829 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
PTPN5P54829 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.81■□□□□ 0.76
PTPN5P54829 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN5P54829 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN5P54829 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN5P54829 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN5P54829 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN5P54829 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN5P54829 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN5P54829 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PTPN5P54829 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PTPN5P54829 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPN5P54829 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.8■□□□□ 0.76
PTPN5P54829 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PTPN5P54829 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN5P54829 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN5P54829 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN5P54829 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN5P54829 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN5P54829 KRT18P13-201ENST00000400056 1290 ntBASIC19.8■□□□□ 0.76
PTPN5P54829 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPN5P54829 TSPY17P-201ENST00000450329 467 ntBASIC19.8■□□□□ 0.76
PTPN5P54829 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPN5P54829 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPN5P54829 UNC93B7-201ENST00000509439 705 ntBASIC19.8■□□□□ 0.76
PTPN5P54829 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPN5P54829 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPN5P54829 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPN5P54829 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN5P54829 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPN5P54829 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.8■□□□□ 0.76
PTPN5P54829 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
PTPN5P54829 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.8■□□□□ 0.76
PTPN5P54829 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN5P54829 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.8■□□□□ 0.76
PTPN5P54829 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
PTPN5P54829 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN5P54829 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN5P54829 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
PTPN5P54829 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN5P54829 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
PTPN5P54829 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN5P54829 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN5P54829 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN5P54829 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN5P54829 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PTPN5P54829 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms