Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC21.17■□□□□ 0.98
ACLYP53396 UNC93B7-201ENST00000509439 705 ntBASIC21.17■□□□□ 0.98
ACLYP53396 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ACLYP53396 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACLYP53396 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC21.17■□□□□ 0.98
ACLYP53396 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.17■□□□□ 0.98
ACLYP53396 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC21.17■□□□□ 0.98
ACLYP53396 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACLYP53396 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACLYP53396 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.17■□□□□ 0.98
ACLYP53396 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
ACLYP53396 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ACLYP53396 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
ACLYP53396 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC21.17■□□□□ 0.98
ACLYP53396 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ACLYP53396 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ACLYP53396 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ACLYP53396 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
ACLYP53396 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACLYP53396 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ACLYP53396 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
ACLYP53396 AP005212.1-201ENST00000581547 1997 ntBASIC21.16■□□□□ 0.98
ACLYP53396 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACLYP53396 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ACLYP53396 AC104417.2-201ENST00000562989 1793 ntBASIC21.16■□□□□ 0.98
ACLYP53396 GPAT2P1-201ENST00000444924 1672 ntBASIC21.16■□□□□ 0.98
ACLYP53396 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACLYP53396 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACLYP53396 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ACLYP53396 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACLYP53396 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACLYP53396 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.16■□□□□ 0.98
ACLYP53396 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ACLYP53396 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ACLYP53396 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACLYP53396 PPIH-202ENST00000372549 327 ntTSL 3 BASIC21.16■□□□□ 0.98
ACLYP53396 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACLYP53396 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC21.16■□□□□ 0.98
ACLYP53396 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.16■□□□□ 0.98
ACLYP53396 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC21.16■□□□□ 0.98
ACLYP53396 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC21.16■□□□□ 0.98
ACLYP53396 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ACLYP53396 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC21.16■□□□□ 0.98
ACLYP53396 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC21.15■□□□□ 0.98
ACLYP53396 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ACLYP53396 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ACLYP53396 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
ACLYP53396 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ACLYP53396 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ACLYP53396 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ACLYP53396 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ACLYP53396 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC21.15■□□□□ 0.98
ACLYP53396 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC21.15■□□□□ 0.98
ACLYP53396 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.15■□□□□ 0.98
ACLYP53396 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ACLYP53396 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC21.15■□□□□ 0.98
ACLYP53396 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC21.15■□□□□ 0.98
ACLYP53396 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC21.15■□□□□ 0.98
ACLYP53396 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
ACLYP53396 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ACLYP53396 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ACLYP53396 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ACLYP53396 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ACLYP53396 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ACLYP53396 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ACLYP53396 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
ACLYP53396 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ACLYP53396 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ACLYP53396 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
ACLYP53396 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ACLYP53396 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ACLYP53396 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ACLYP53396 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC21.14■□□□□ 0.97
ACLYP53396 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ACLYP53396 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC21.14■□□□□ 0.97
ACLYP53396 KRT17P6-201ENST00000453795 1220 ntBASIC21.14■□□□□ 0.97
ACLYP53396 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC21.14■□□□□ 0.97
ACLYP53396 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC21.14■□□□□ 0.97
ACLYP53396 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC21.14■□□□□ 0.97
ACLYP53396 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ACLYP53396 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ACLYP53396 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.14■□□□□ 0.97
ACLYP53396 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ACLYP53396 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ACLYP53396 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.14■□□□□ 0.97
ACLYP53396 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC21.13■□□□□ 0.97
ACLYP53396 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACLYP53396 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ACLYP53396 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ACLYP53396 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC21.13■□□□□ 0.97
ACLYP53396 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC21.13■□□□□ 0.97
ACLYP53396 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
ACLYP53396 AL512408.1-201ENST00000569378 2000 ntBASIC21.13■□□□□ 0.97
ACLYP53396 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ACLYP53396 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACLYP53396 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
ACLYP53396 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.13■□□□□ 0.97
ACLYP53396 FAAHP1-202ENST00000446499 1238 ntBASIC21.13■□□□□ 0.97
ACLYP53396 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.13■□□□□ 0.97
ACLYP53396 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC21.13■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms