Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CBX5P45973 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
CBX5P45973 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC16.5■□□□□ 0.23
CBX5P45973 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CBX5P45973 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CBX5P45973 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CBX5P45973 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.5■□□□□ 0.23
CBX5P45973 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC16.5■□□□□ 0.23
CBX5P45973 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC16.5■□□□□ 0.23
CBX5P45973 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
CBX5P45973 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CBX5P45973 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.5■□□□□ 0.23
CBX5P45973 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CBX5P45973 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CBX5P45973 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CBX5P45973 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CBX5P45973 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CBX5P45973 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC16.49■□□□□ 0.23
CBX5P45973 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.49■□□□□ 0.23
CBX5P45973 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.49■□□□□ 0.23
CBX5P45973 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.49■□□□□ 0.23
CBX5P45973 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 AC023632.3-201ENST00000521633 145 ntBASIC16.49■□□□□ 0.23
CBX5P45973 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 AL161938.1-201ENST00000569833 2180 ntBASIC16.49■□□□□ 0.23
CBX5P45973 RAB43-208ENST00000615093 783 ntTSL 5 BASIC16.49■□□□□ 0.23
CBX5P45973 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 AC013268.1-206ENST00000638368 961 ntBASIC16.49■□□□□ 0.23
CBX5P45973 AC112229.1-201ENST00000639295 961 ntBASIC16.49■□□□□ 0.23
CBX5P45973 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC16.49■□□□□ 0.23
CBX5P45973 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 AC141586.3-201ENST00000562166 1838 ntBASIC16.49■□□□□ 0.23
CBX5P45973 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CBX5P45973 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CBX5P45973 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CBX5P45973 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CBX5P45973 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.48■□□□□ 0.23
CBX5P45973 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CBX5P45973 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CBX5P45973 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.48■□□□□ 0.23
CBX5P45973 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CBX5P45973 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX5P45973 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX5P45973 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX5P45973 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.48■□□□□ 0.23
CBX5P45973 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
CBX5P45973 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
CBX5P45973 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX5P45973 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CBX5P45973 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX5P45973 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CBX5P45973 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CBX5P45973 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.48■□□□□ 0.23
CBX5P45973 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CBX5P45973 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX5P45973 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX5P45973 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX5P45973 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CBX5P45973 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC16.48■□□□□ 0.23
CBX5P45973 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CBX5P45973 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CBX5P45973 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms