Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 COX11P1-201ENST00000489116 835 ntBASIC20.79■□□□□ 0.92
HOXA11P31270 MIR4674-201ENST00000582457 87 ntBASIC20.79■□□□□ 0.92
HOXA11P31270 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.79■□□□□ 0.92
HOXA11P31270 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.79■□□□□ 0.92
HOXA11P31270 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
HOXA11P31270 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HOXA11P31270 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXA11P31270 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
HOXA11P31270 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HOXA11P31270 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA11P31270 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA11P31270 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXA11P31270 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA11P31270 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA11P31270 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXA11P31270 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA11P31270 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXA11P31270 Z82202.1-201ENST00000623446 1880 ntBASIC20.78■□□□□ 0.92
HOXA11P31270 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.78■□□□□ 0.92
HOXA11P31270 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.78■□□□□ 0.92
HOXA11P31270 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXA11P31270 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA11P31270 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.78■□□□□ 0.92
HOXA11P31270 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA11P31270 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA11P31270 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA11P31270 RNF152P1-201ENST00000397754 604 ntBASIC20.78■□□□□ 0.92
HOXA11P31270 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXA11P31270 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA11P31270 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC20.78■□□□□ 0.92
HOXA11P31270 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXA11P31270 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.78■□□□□ 0.92
HOXA11P31270 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA11P31270 AC008622.2-201ENST00000617006 1229 ntBASIC20.78■□□□□ 0.92
HOXA11P31270 AC011558.1-201ENST00000623459 338 ntBASIC20.78■□□□□ 0.92
HOXA11P31270 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA11P31270 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.78■□□□□ 0.92
HOXA11P31270 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA11P31270 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA11P31270 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
HOXA11P31270 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA11P31270 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
HOXA11P31270 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA11P31270 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA11P31270 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA11P31270 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.77■□□□□ 0.92
HOXA11P31270 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC20.77■□□□□ 0.92
HOXA11P31270 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC20.77■□□□□ 0.92
HOXA11P31270 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.77■□□□□ 0.92
HOXA11P31270 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA11P31270 AL512604.3-201ENST00000569583 964 ntBASIC20.77■□□□□ 0.92
HOXA11P31270 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA11P31270 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
HOXA11P31270 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA11P31270 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA11P31270 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA11P31270 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
HOXA11P31270 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
HOXA11P31270 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.77■□□□□ 0.91
HOXA11P31270 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
HOXA11P31270 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
HOXA11P31270 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.77■□□□□ 0.91
HOXA11P31270 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
HOXA11P31270 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA11P31270 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.76■□□□□ 0.91
HOXA11P31270 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA11P31270 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA11P31270 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.76■□□□□ 0.91
HOXA11P31270 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA11P31270 TSPY5P-201ENST00000426936 936 ntBASIC20.76■□□□□ 0.91
HOXA11P31270 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC20.76■□□□□ 0.91
HOXA11P31270 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC20.76■□□□□ 0.91
HOXA11P31270 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.76■□□□□ 0.91
HOXA11P31270 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC20.76■□□□□ 0.91
HOXA11P31270 AC022616.7-201ENST00000525383 220 ntBASIC20.76■□□□□ 0.91
HOXA11P31270 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA11P31270 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.76■□□□□ 0.91
HOXA11P31270 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.76■□□□□ 0.91
HOXA11P31270 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
HOXA11P31270 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.76■□□□□ 0.91
HOXA11P31270 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.76■□□□□ 0.91
HOXA11P31270 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA11P31270 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
HOXA11P31270 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HOXA11P31270 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXA11P31270 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC20.75■□□□□ 0.91
HOXA11P31270 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HOXA11P31270 AL158211.5-201ENST00000623583 2518 ntBASIC20.75■□□□□ 0.91
HOXA11P31270 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXA11P31270 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXA11P31270 FAM8A6P-201ENST00000407496 1135 ntBASIC20.75■□□□□ 0.91
HOXA11P31270 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HOXA11P31270 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC20.75■□□□□ 0.91
HOXA11P31270 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC20.75■□□□□ 0.91
HOXA11P31270 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
HOXA11P31270 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HOXA11P31270 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HOXA11P31270 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.75■□□□□ 0.91
HOXA11P31270 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HOXA11P31270 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms