Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC19.29■□□□□ 0.68
CCND1P24385 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC19.28■□□□□ 0.68
CCND1P24385 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCND1P24385 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCND1P24385 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCND1P24385 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
CCND1P24385 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CCND1P24385 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.28■□□□□ 0.68
CCND1P24385 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
CCND1P24385 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.28■□□□□ 0.68
CCND1P24385 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.28■□□□□ 0.68
CCND1P24385 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.28■□□□□ 0.68
CCND1P24385 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCND1P24385 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCND1P24385 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.28■□□□□ 0.68
CCND1P24385 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CCND1P24385 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.28■□□□□ 0.68
CCND1P24385 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CCND1P24385 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCND1P24385 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
CCND1P24385 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCND1P24385 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCND1P24385 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCND1P24385 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CCND1P24385 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.28■□□□□ 0.68
CCND1P24385 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCND1P24385 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCND1P24385 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCND1P24385 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCND1P24385 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CCND1P24385 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCND1P24385 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
CCND1P24385 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCND1P24385 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CCND1P24385 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCND1P24385 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCND1P24385 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
CCND1P24385 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.27■□□□□ 0.68
CCND1P24385 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCND1P24385 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CCND1P24385 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCND1P24385 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCND1P24385 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCND1P24385 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCND1P24385 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.27■□□□□ 0.68
CCND1P24385 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC19.27■□□□□ 0.68
CCND1P24385 PNMA6B-201ENST00000538162 1200 ntBASIC19.27■□□□□ 0.68
CCND1P24385 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCND1P24385 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
CCND1P24385 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
CCND1P24385 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CCND1P24385 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
CCND1P24385 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CCND1P24385 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.27■□□□□ 0.67
CCND1P24385 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CCND1P24385 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCND1P24385 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.27■□□□□ 0.67
CCND1P24385 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
CCND1P24385 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.26■□□□□ 0.67
CCND1P24385 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCND1P24385 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC19.26■□□□□ 0.67
CCND1P24385 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCND1P24385 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
CCND1P24385 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCND1P24385 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCND1P24385 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.26■□□□□ 0.67
CCND1P24385 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCND1P24385 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCND1P24385 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCND1P24385 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CCND1P24385 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCND1P24385 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCND1P24385 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC19.26■□□□□ 0.67
CCND1P24385 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.26■□□□□ 0.67
CCND1P24385 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.26■□□□□ 0.67
CCND1P24385 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC19.26■□□□□ 0.67
CCND1P24385 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC19.26■□□□□ 0.67
CCND1P24385 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCND1P24385 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCND1P24385 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCND1P24385 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCND1P24385 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCND1P24385 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CCND1P24385 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.26■□□□□ 0.67
CCND1P24385 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CCND1P24385 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.26■□□□□ 0.67
CCND1P24385 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.26■□□□□ 0.67
CCND1P24385 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCND1P24385 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.25■□□□□ 0.67
CCND1P24385 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCND1P24385 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCND1P24385 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.25■□□□□ 0.67
CCND1P24385 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCND1P24385 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
CCND1P24385 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
CCND1P24385 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.25■□□□□ 0.67
CCND1P24385 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.25■□□□□ 0.67
CCND1P24385 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC19.25■□□□□ 0.67
CCND1P24385 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC19.25■□□□□ 0.67
CCND1P24385 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms