Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 AL031985.4-201ENST00000642138 673 ntBASIC19.76■□□□□ 0.75
ERCC2P18074 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.76■□□□□ 0.75
ERCC2P18074 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC2P18074 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC2P18074 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC2P18074 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.76■□□□□ 0.75
ERCC2P18074 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC2P18074 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC2P18074 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC2P18074 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
ERCC2P18074 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.76■□□□□ 0.75
ERCC2P18074 AL161938.1-201ENST00000569833 2180 ntBASIC19.76■□□□□ 0.75
ERCC2P18074 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC2P18074 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.75■□□□□ 0.75
ERCC2P18074 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC2P18074 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.75■□□□□ 0.75
ERCC2P18074 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC2P18074 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC19.75■□□□□ 0.75
ERCC2P18074 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.75■□□□□ 0.75
ERCC2P18074 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC2P18074 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC2P18074 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ERCC2P18074 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.75■□□□□ 0.75
ERCC2P18074 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.75■□□□□ 0.75
ERCC2P18074 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.75■□□□□ 0.75
ERCC2P18074 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC2P18074 CD177P1-201ENST00000606252 935 ntBASIC19.75■□□□□ 0.75
ERCC2P18074 AC113410.3-201ENST00000623366 203 ntBASIC19.75■□□□□ 0.75
ERCC2P18074 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC2P18074 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC2P18074 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC2P18074 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
ERCC2P18074 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC2P18074 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC2P18074 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.75■□□□□ 0.75
ERCC2P18074 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ERCC2P18074 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC2P18074 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC2P18074 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.74■□□□□ 0.75
ERCC2P18074 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC2P18074 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC2P18074 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC2P18074 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC2P18074 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.74■□□□□ 0.75
ERCC2P18074 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC2P18074 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC2P18074 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC2P18074 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.74■□□□□ 0.75
ERCC2P18074 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC2P18074 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC2P18074 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC2P18074 AC008550.1-201ENST00000511500 884 ntBASIC19.74■□□□□ 0.75
ERCC2P18074 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.74■□□□□ 0.75
ERCC2P18074 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.74■□□□□ 0.75
ERCC2P18074 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC19.74■□□□□ 0.75
ERCC2P18074 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.74■□□□□ 0.75
ERCC2P18074 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC19.74■□□□□ 0.75
ERCC2P18074 AL049637.2-201ENST00000641778 930 ntBASIC19.74■□□□□ 0.75
ERCC2P18074 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.74■□□□□ 0.75
ERCC2P18074 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC2P18074 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC2P18074 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
ERCC2P18074 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.74■□□□□ 0.75
ERCC2P18074 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
ERCC2P18074 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC2P18074 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ERCC2P18074 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ERCC2P18074 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC2P18074 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC2P18074 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC2P18074 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC2P18074 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC2P18074 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.73■□□□□ 0.75
ERCC2P18074 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC2P18074 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC19.73■□□□□ 0.75
ERCC2P18074 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC2P18074 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC2P18074 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ERCC2P18074 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
ERCC2P18074 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC2P18074 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.73■□□□□ 0.75
ERCC2P18074 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
ERCC2P18074 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC2P18074 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.73■□□□□ 0.75
ERCC2P18074 TSPY23P-201ENST00000440136 739 ntBASIC19.73■□□□□ 0.75
ERCC2P18074 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC19.73■□□□□ 0.75
ERCC2P18074 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.73■□□□□ 0.75
ERCC2P18074 AC026271.3-201ENST00000571884 352 ntBASIC19.73■□□□□ 0.75
ERCC2P18074 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.73■□□□□ 0.75
ERCC2P18074 AP001412.1-201ENST00000608405 714 ntBASIC19.73■□□□□ 0.75
ERCC2P18074 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC2P18074 IRX1P1-201ENST00000438849 1838 ntBASIC19.73■□□□□ 0.75
ERCC2P18074 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC2P18074 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC2P18074 RCC2P6-201ENST00000526625 1557 ntBASIC19.73■□□□□ 0.75
ERCC2P18074 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC2P18074 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ERCC2P18074 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
ERCC2P18074 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.73■□□□□ 0.75
ERCC2P18074 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms