Protein–RNA interactions for Protein: P0CG40

SP9, Transcription factor Sp9, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SP9P0CG40 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SP9P0CG40 LINC00167-201ENST00000530583 1419 ntBASIC18.93■□□□□ 0.62
SP9P0CG40 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.93■□□□□ 0.62
SP9P0CG40 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SP9P0CG40 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SP9P0CG40 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SP9P0CG40 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SP9P0CG40 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SP9P0CG40 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SP9P0CG40 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SP9P0CG40 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SP9P0CG40 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SP9P0CG40 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SP9P0CG40 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SP9P0CG40 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC18.93■□□□□ 0.62
SP9P0CG40 KRT18P58-201ENST00000527480 1120 ntBASIC18.93■□□□□ 0.62
SP9P0CG40 SLC25A1P1-201ENST00000528351 927 ntBASIC18.93■□□□□ 0.62
SP9P0CG40 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SP9P0CG40 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.93■□□□□ 0.62
SP9P0CG40 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC18.93■□□□□ 0.62
SP9P0CG40 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.93■□□□□ 0.62
SP9P0CG40 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SP9P0CG40 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SP9P0CG40 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SP9P0CG40 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SP9P0CG40 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SP9P0CG40 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.93■□□□□ 0.62
SP9P0CG40 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.93■□□□□ 0.62
SP9P0CG40 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.93■□□□□ 0.62
SP9P0CG40 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SP9P0CG40 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SP9P0CG40 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SP9P0CG40 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SP9P0CG40 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SP9P0CG40 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
SP9P0CG40 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
SP9P0CG40 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SP9P0CG40 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC18.92■□□□□ 0.62
SP9P0CG40 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SP9P0CG40 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.92■□□□□ 0.62
SP9P0CG40 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.92■□□□□ 0.62
SP9P0CG40 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.92■□□□□ 0.62
SP9P0CG40 RNA5SP419-201ENST00000515908 135 ntBASIC18.92■□□□□ 0.62
SP9P0CG40 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
SP9P0CG40 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.92■□□□□ 0.62
SP9P0CG40 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.92■□□□□ 0.62
SP9P0CG40 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC18.92■□□□□ 0.62
SP9P0CG40 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SP9P0CG40 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SP9P0CG40 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SP9P0CG40 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SP9P0CG40 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SP9P0CG40 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SP9P0CG40 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SP9P0CG40 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC18.91■□□□□ 0.62
SP9P0CG40 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SP9P0CG40 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.91■□□□□ 0.62
SP9P0CG40 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SP9P0CG40 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SP9P0CG40 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SP9P0CG40 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SP9P0CG40 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18.91■□□□□ 0.62
SP9P0CG40 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SP9P0CG40 SAPCD2P3-201ENST00000455031 850 ntBASIC18.91■□□□□ 0.62
SP9P0CG40 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC18.91■□□□□ 0.62
SP9P0CG40 AC090616.6-201ENST00000582640 721 ntBASIC18.91■□□□□ 0.62
SP9P0CG40 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.91■□□□□ 0.62
SP9P0CG40 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.91■□□□□ 0.62
SP9P0CG40 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
SP9P0CG40 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SP9P0CG40 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.91■□□□□ 0.62
SP9P0CG40 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.91■□□□□ 0.62
SP9P0CG40 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SP9P0CG40 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
SP9P0CG40 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.91■□□□□ 0.62
SP9P0CG40 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SP9P0CG40 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.91■□□□□ 0.62
SP9P0CG40 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
SP9P0CG40 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SP9P0CG40 Z83836.1-201ENST00000624605 1642 ntBASIC18.9■□□□□ 0.62
SP9P0CG40 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SP9P0CG40 TLE1-202ENST00000376484 666 ntTSL 3 BASIC18.9■□□□□ 0.62
SP9P0CG40 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SP9P0CG40 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.9■□□□□ 0.62
SP9P0CG40 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.9■□□□□ 0.62
SP9P0CG40 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.9■□□□□ 0.62
SP9P0CG40 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SP9P0CG40 MIR3917-201ENST00000580971 93 ntBASIC18.9■□□□□ 0.62
SP9P0CG40 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.9■□□□□ 0.62
SP9P0CG40 IGHV3-41-201ENST00000613121 348 ntBASIC18.9■□□□□ 0.62
SP9P0CG40 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.9■□□□□ 0.62
SP9P0CG40 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SP9P0CG40 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.9■□□□□ 0.62
SP9P0CG40 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.9■□□□□ 0.62
SP9P0CG40 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SP9P0CG40 AC233702.3-201ENST00000578656 1387 ntBASIC18.9■□□□□ 0.62
SP9P0CG40 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SP9P0CG40 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.9■□□□□ 0.62
SP9P0CG40 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
SP9P0CG40 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms