Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.7■■□□□ 1.06
HOXC6P09630 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
HOXC6P09630 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
HOXC6P09630 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HOXC6P09630 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC6P09630 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC21.69■■□□□ 1.06
HOXC6P09630 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC6P09630 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC6P09630 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.69■■□□□ 1.06
HOXC6P09630 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC21.69■■□□□ 1.06
HOXC6P09630 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC6P09630 AL512408.1-201ENST00000569378 2000 ntBASIC21.69■■□□□ 1.06
HOXC6P09630 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC6P09630 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC6P09630 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
HOXC6P09630 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC21.69■■□□□ 1.06
HOXC6P09630 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC21.69■■□□□ 1.06
HOXC6P09630 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC21.69■■□□□ 1.06
HOXC6P09630 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC6P09630 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC6P09630 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC6P09630 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC6P09630 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
HOXC6P09630 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
HOXC6P09630 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC21.69■■□□□ 1.06
HOXC6P09630 AL691432.2-201ENST00000607222 2038 ntBASIC21.68■■□□□ 1.06
HOXC6P09630 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
HOXC6P09630 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC6P09630 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC21.68■■□□□ 1.06
HOXC6P09630 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC6P09630 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC6P09630 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC6P09630 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
HOXC6P09630 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC21.68■■□□□ 1.06
HOXC6P09630 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC21.68■■□□□ 1.06
HOXC6P09630 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC21.68■■□□□ 1.06
HOXC6P09630 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC21.68■■□□□ 1.06
HOXC6P09630 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC21.68■■□□□ 1.06
HOXC6P09630 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC21.68■■□□□ 1.06
HOXC6P09630 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC6P09630 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.68■■□□□ 1.06
HOXC6P09630 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC21.68■■□□□ 1.06
HOXC6P09630 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC21.68■■□□□ 1.06
HOXC6P09630 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC6P09630 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC6P09630 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC6P09630 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
HOXC6P09630 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC6P09630 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
HOXC6P09630 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.67■■□□□ 1.06
HOXC6P09630 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC6P09630 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
HOXC6P09630 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC6P09630 AL162377.1-201ENST00000618844 1793 ntBASIC21.67■■□□□ 1.06
HOXC6P09630 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC6P09630 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC21.67■■□□□ 1.06
HOXC6P09630 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC6P09630 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.67■■□□□ 1.06
HOXC6P09630 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.67■■□□□ 1.06
HOXC6P09630 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
HOXC6P09630 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC6P09630 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC6P09630 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC6P09630 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC6P09630 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC6P09630 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC6P09630 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC21.67■■□□□ 1.06
HOXC6P09630 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC6P09630 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
HOXC6P09630 RASA4DP-201ENST00000460726 1199 ntBASIC21.67■■□□□ 1.06
HOXC6P09630 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC6P09630 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
HOXC6P09630 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC21.67■■□□□ 1.06
HOXC6P09630 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC6P09630 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.67■■□□□ 1.06
HOXC6P09630 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC21.67■■□□□ 1.06
HOXC6P09630 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC21.67■■□□□ 1.06
HOXC6P09630 LINC01006-201ENST00000333319 2292 ntBASIC21.67■■□□□ 1.06
HOXC6P09630 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
HOXC6P09630 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HOXC6P09630 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HOXC6P09630 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
HOXC6P09630 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.66■■□□□ 1.06
HOXC6P09630 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
HOXC6P09630 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HOXC6P09630 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.66■■□□□ 1.06
HOXC6P09630 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HOXC6P09630 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
HOXC6P09630 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HOXC6P09630 AL645929.1-201ENST00000420084 975 ntBASIC21.66■■□□□ 1.06
HOXC6P09630 TSPY21P-201ENST00000433481 731 ntBASIC21.66■■□□□ 1.06
HOXC6P09630 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HOXC6P09630 TSPY23P-201ENST00000440136 739 ntBASIC21.66■■□□□ 1.06
HOXC6P09630 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
HOXC6P09630 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.66■■□□□ 1.06
HOXC6P09630 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
HOXC6P09630 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
HOXC6P09630 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
HOXC6P09630 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
HOXC6P09630 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms