Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.57■□□□□ 0.88
TUBB4AP04350 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
TUBB4AP04350 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBB4AP04350 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TUBB4AP04350 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TUBB4AP04350 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBB4AP04350 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBB4AP04350 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC20.57■□□□□ 0.88
TUBB4AP04350 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBB4AP04350 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBB4AP04350 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
TUBB4AP04350 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBB4AP04350 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.57■□□□□ 0.88
TUBB4AP04350 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC20.57■□□□□ 0.88
TUBB4AP04350 AP001330.3-201ENST00000520123 633 ntBASIC20.57■□□□□ 0.88
TUBB4AP04350 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
TUBB4AP04350 AC100791.3-201ENST00000617619 330 ntBASIC20.57■□□□□ 0.88
TUBB4AP04350 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBB4AP04350 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBB4AP04350 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBB4AP04350 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBB4AP04350 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.57■□□□□ 0.88
TUBB4AP04350 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
TUBB4AP04350 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBB4AP04350 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
TUBB4AP04350 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TUBB4AP04350 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TUBB4AP04350 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TUBB4AP04350 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TUBB4AP04350 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TUBB4AP04350 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
TUBB4AP04350 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.56■□□□□ 0.88
TUBB4AP04350 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TUBB4AP04350 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TUBB4AP04350 MIR935-201ENST00000401179 91 ntBASIC20.56■□□□□ 0.88
TUBB4AP04350 AF213884.3-201ENST00000563833 479 ntBASIC20.56■□□□□ 0.88
TUBB4AP04350 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC20.56■□□□□ 0.88
TUBB4AP04350 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.56■□□□□ 0.88
TUBB4AP04350 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TUBB4AP04350 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
TUBB4AP04350 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
TUBB4AP04350 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
TUBB4AP04350 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
TUBB4AP04350 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TUBB4AP04350 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBB4AP04350 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBB4AP04350 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
TUBB4AP04350 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
TUBB4AP04350 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TUBB4AP04350 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBB4AP04350 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC20.55■□□□□ 0.88
TUBB4AP04350 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBB4AP04350 CD276-203ENST00000537340 2439 ntTSL 2 BASIC20.55■□□□□ 0.88
TUBB4AP04350 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.55■□□□□ 0.88
TUBB4AP04350 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBB4AP04350 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.55■□□□□ 0.88
TUBB4AP04350 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
TUBB4AP04350 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBB4AP04350 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBB4AP04350 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBB4AP04350 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBB4AP04350 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TUBB4AP04350 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBB4AP04350 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.55■□□□□ 0.88
TUBB4AP04350 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.55■□□□□ 0.88
TUBB4AP04350 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TUBB4AP04350 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC20.55■□□□□ 0.88
TUBB4AP04350 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TUBB4AP04350 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TUBB4AP04350 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TUBB4AP04350 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBB4AP04350 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TUBB4AP04350 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBB4AP04350 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBB4AP04350 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
TUBB4AP04350 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
TUBB4AP04350 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
TUBB4AP04350 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBB4AP04350 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.54■□□□□ 0.88
TUBB4AP04350 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBB4AP04350 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBB4AP04350 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBB4AP04350 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TUBB4AP04350 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
TUBB4AP04350 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TUBB4AP04350 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBB4AP04350 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBB4AP04350 MIR939-201ENST00000401314 82 ntBASIC20.54■□□□□ 0.88
TUBB4AP04350 AC091305.1-201ENST00000479476 895 ntBASIC20.54■□□□□ 0.88
TUBB4AP04350 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC20.54■□□□□ 0.88
TUBB4AP04350 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
TUBB4AP04350 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TUBB4AP04350 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBB4AP04350 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
TUBB4AP04350 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
TUBB4AP04350 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC20.54■□□□□ 0.88
TUBB4AP04350 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.54■□□□□ 0.88
TUBB4AP04350 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.54■□□□□ 0.88
TUBB4AP04350 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
TUBB4AP04350 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms