Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 AL160286.2-201ENST00000567150 934 ntBASIC17.38■□□□□ 0.37
SPTA1P02549 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.38■□□□□ 0.37
SPTA1P02549 AL031008.1-201ENST00000619963 541 ntBASIC17.38■□□□□ 0.37
SPTA1P02549 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC17.38■□□□□ 0.37
SPTA1P02549 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPTA1P02549 EP400NL-214ENST00000641289 2402 ntBASIC17.37■□□□□ 0.37
SPTA1P02549 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPTA1P02549 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPTA1P02549 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPTA1P02549 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.37■□□□□ 0.37
SPTA1P02549 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC17.37■□□□□ 0.37
SPTA1P02549 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC17.37■□□□□ 0.37
SPTA1P02549 LINC01711-201ENST00000598340 967 ntBASIC17.37■□□□□ 0.37
SPTA1P02549 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.37■□□□□ 0.37
SPTA1P02549 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.37■□□□□ 0.37
SPTA1P02549 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPTA1P02549 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPTA1P02549 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
SPTA1P02549 MIR662-201ENST00000384847 95 ntBASIC17.37■□□□□ 0.37
SPTA1P02549 MRPL3P1-201ENST00000400109 1033 ntBASIC17.37■□□□□ 0.37
SPTA1P02549 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPTA1P02549 AF228730.7-201ENST00000641842 219 ntBASIC17.37■□□□□ 0.37
SPTA1P02549 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.37■□□□□ 0.37
SPTA1P02549 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPTA1P02549 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SPTA1P02549 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SPTA1P02549 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
SPTA1P02549 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC17.36■□□□□ 0.37
SPTA1P02549 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC17.36■□□□□ 0.37
SPTA1P02549 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.36■□□□□ 0.37
SPTA1P02549 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC17.36■□□□□ 0.37
SPTA1P02549 TSPY22P-201ENST00000427496 604 ntBASIC17.36■□□□□ 0.37
SPTA1P02549 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC17.36■□□□□ 0.37
SPTA1P02549 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.36■□□□□ 0.37
SPTA1P02549 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.36■□□□□ 0.37
SPTA1P02549 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPTA1P02549 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPTA1P02549 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPTA1P02549 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.36■□□□□ 0.37
SPTA1P02549 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPTA1P02549 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPTA1P02549 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPTA1P02549 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPTA1P02549 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SPTA1P02549 HTR5BP-201ENST00000430851 1154 ntBASIC17.36■□□□□ 0.37
SPTA1P02549 AC079781.3-201ENST00000449110 356 ntBASIC17.36■□□□□ 0.37
SPTA1P02549 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
SPTA1P02549 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPTA1P02549 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPTA1P02549 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPTA1P02549 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC17.35■□□□□ 0.37
SPTA1P02549 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SPTA1P02549 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC17.35■□□□□ 0.37
SPTA1P02549 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPTA1P02549 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.35■□□□□ 0.37
SPTA1P02549 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SPTA1P02549 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPTA1P02549 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPTA1P02549 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPTA1P02549 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
SPTA1P02549 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC17.35■□□□□ 0.37
SPTA1P02549 RNA5SP419-201ENST00000515908 135 ntBASIC17.35■□□□□ 0.37
SPTA1P02549 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.35■□□□□ 0.37
SPTA1P02549 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.35■□□□□ 0.37
SPTA1P02549 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.35■□□□□ 0.37
SPTA1P02549 MPI-205ENST00000562606 1052 ntTSL 3 BASIC17.35■□□□□ 0.37
SPTA1P02549 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPTA1P02549 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.35■□□□□ 0.37
SPTA1P02549 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPTA1P02549 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPTA1P02549 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPTA1P02549 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.35■□□□□ 0.37
SPTA1P02549 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPTA1P02549 FEM1AP4-201ENST00000443167 1987 ntBASIC17.35■□□□□ 0.37
SPTA1P02549 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SPTA1P02549 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SPTA1P02549 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC17.35■□□□□ 0.37
SPTA1P02549 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPTA1P02549 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPTA1P02549 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPTA1P02549 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.35■□□□□ 0.37
SPTA1P02549 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPTA1P02549 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.35■□□□□ 0.37
SPTA1P02549 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
SPTA1P02549 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
SPTA1P02549 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.34■□□□□ 0.37
SPTA1P02549 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.34■□□□□ 0.37
SPTA1P02549 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPTA1P02549 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.34■□□□□ 0.37
SPTA1P02549 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPTA1P02549 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPTA1P02549 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPTA1P02549 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPTA1P02549 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
SPTA1P02549 MIR574-201ENST00000385209 96 ntBASIC17.34■□□□□ 0.37
SPTA1P02549 KRT18P67-201ENST00000432816 1264 ntBASIC17.34■□□□□ 0.37
SPTA1P02549 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPTA1P02549 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.34■□□□□ 0.37
SPTA1P02549 AP002414.4-201ENST00000589764 1148 ntBASIC17.34■□□□□ 0.37
SPTA1P02549 VPS51-217ENST00000639871 243 ntTSL 5 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 65 ms