Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A1P02452 CD320-202ENST00000537716 1119 ntTSL 2 BASIC23.17■■□□□ 1.3
COL1A1P02452 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC23.17■■□□□ 1.3
COL1A1P02452 NT5C-210ENST00000582160 860 ntTSL 2 BASIC23.17■■□□□ 1.3
COL1A1P02452 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A1P02452 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
COL1A1P02452 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC23.16■■□□□ 1.3
COL1A1P02452 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL1A1P02452 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC23.16■■□□□ 1.3
COL1A1P02452 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL1A1P02452 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC23.16■■□□□ 1.3
COL1A1P02452 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL1A1P02452 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC23.16■■□□□ 1.3
COL1A1P02452 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
COL1A1P02452 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC23.16■■□□□ 1.3
COL1A1P02452 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC23.16■■□□□ 1.3
COL1A1P02452 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC23.16■■□□□ 1.3
COL1A1P02452 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC23.16■■□□□ 1.3
COL1A1P02452 KRT126P-201ENST00000549467 1181 ntBASIC23.16■■□□□ 1.3
COL1A1P02452 AL441883.1-201ENST00000566170 1045 ntBASIC23.16■■□□□ 1.3
COL1A1P02452 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC23.16■■□□□ 1.3
COL1A1P02452 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC23.16■■□□□ 1.3
COL1A1P02452 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
COL1A1P02452 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC23.15■■□□□ 1.3
COL1A1P02452 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL1A1P02452 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC23.15■■□□□ 1.3
COL1A1P02452 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL1A1P02452 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL1A1P02452 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC23.15■■□□□ 1.3
COL1A1P02452 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
COL1A1P02452 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL1A1P02452 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL1A1P02452 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
COL1A1P02452 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL1A1P02452 PCED1CP-201ENST00000419887 785 ntBASIC23.15■■□□□ 1.3
COL1A1P02452 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC23.15■■□□□ 1.3
COL1A1P02452 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC23.15■■□□□ 1.3
COL1A1P02452 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC23.15■■□□□ 1.3
COL1A1P02452 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC23.15■■□□□ 1.3
COL1A1P02452 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL1A1P02452 IER3-202ENST00000376377 1350 ntBASIC23.15■■□□□ 1.3
COL1A1P02452 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL1A1P02452 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC23.15■■□□□ 1.3
COL1A1P02452 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL1A1P02452 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
COL1A1P02452 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
COL1A1P02452 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
COL1A1P02452 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
COL1A1P02452 PCDHAC2-203ENST00000615316 3011 ntBASIC23.15■■□□□ 1.3
COL1A1P02452 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC23.14■■□□□ 1.3
COL1A1P02452 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL1A1P02452 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL1A1P02452 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC23.14■■□□□ 1.3
COL1A1P02452 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.3
COL1A1P02452 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.3
COL1A1P02452 GAS2L1P1-201ENST00000420145 1480 ntBASIC23.14■■□□□ 1.3
COL1A1P02452 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL1A1P02452 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL1A1P02452 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
COL1A1P02452 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC23.14■■□□□ 1.29
COL1A1P02452 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC23.14■■□□□ 1.29
COL1A1P02452 AL031432.5-201ENST00000641059 760 ntBASIC23.14■■□□□ 1.29
COL1A1P02452 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL1A1P02452 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC23.14■■□□□ 1.29
COL1A1P02452 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.29
COL1A1P02452 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
COL1A1P02452 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC23.14■■□□□ 1.29
COL1A1P02452 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
COL1A1P02452 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL1A1P02452 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC23.13■■□□□ 1.29
COL1A1P02452 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC23.13■■□□□ 1.29
COL1A1P02452 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL1A1P02452 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL1A1P02452 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC23.13■■□□□ 1.29
COL1A1P02452 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.13■■□□□ 1.29
COL1A1P02452 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC23.13■■□□□ 1.29
COL1A1P02452 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
COL1A1P02452 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL1A1P02452 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC23.13■■□□□ 1.29
COL1A1P02452 ILF2-202ENST00000368681 726 ntTSL 2 BASIC23.13■■□□□ 1.29
COL1A1P02452 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
COL1A1P02452 AL671277.2-201ENST00000458060 996 ntBASIC23.13■■□□□ 1.29
COL1A1P02452 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC23.13■■□□□ 1.29
COL1A1P02452 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC23.13■■□□□ 1.29
COL1A1P02452 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC23.13■■□□□ 1.29
COL1A1P02452 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC23.13■■□□□ 1.29
COL1A1P02452 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL1A1P02452 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
COL1A1P02452 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
COL1A1P02452 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
COL1A1P02452 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC23.13■■□□□ 1.29
COL1A1P02452 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC23.13■■□□□ 1.29
COL1A1P02452 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC23.13■■□□□ 1.29
COL1A1P02452 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL1A1P02452 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
COL1A1P02452 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
COL1A1P02452 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
COL1A1P02452 DUSP5P1-201ENST00000441325 1139 ntBASIC23.12■■□□□ 1.29
COL1A1P02452 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC23.12■■□□□ 1.29
COL1A1P02452 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC23.12■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms