Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 AC012615.1-201ENST00000565797 1299 ntBASIC20.78■□□□□ 0.92
TIMP1P01033 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.78■□□□□ 0.92
TIMP1P01033 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TIMP1P01033 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
TIMP1P01033 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.78■□□□□ 0.92
TIMP1P01033 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.78■□□□□ 0.92
TIMP1P01033 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
TIMP1P01033 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
TIMP1P01033 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
TIMP1P01033 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.78■□□□□ 0.92
TIMP1P01033 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TIMP1P01033 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
TIMP1P01033 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TIMP1P01033 AC036111.1-201ENST00000533973 1582 ntBASIC20.77■□□□□ 0.92
TIMP1P01033 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.77■□□□□ 0.92
TIMP1P01033 AC009237.14-201ENST00000609975 1594 ntBASIC20.77■□□□□ 0.92
TIMP1P01033 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TIMP1P01033 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TIMP1P01033 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TIMP1P01033 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.92
TIMP1P01033 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TIMP1P01033 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TIMP1P01033 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TIMP1P01033 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TIMP1P01033 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
TIMP1P01033 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.77■□□□□ 0.92
TIMP1P01033 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TIMP1P01033 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TIMP1P01033 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TIMP1P01033 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.77■□□□□ 0.92
TIMP1P01033 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TIMP1P01033 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TIMP1P01033 SEC1P-202ENST00000473944 940 ntBASIC20.77■□□□□ 0.92
TIMP1P01033 AP002469.2-201ENST00000531724 424 ntBASIC20.77■□□□□ 0.92
TIMP1P01033 SLC25A6P4-201ENST00000586535 553 ntBASIC20.77■□□□□ 0.92
TIMP1P01033 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.77■□□□□ 0.92
TIMP1P01033 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TIMP1P01033 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
TIMP1P01033 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC20.77■□□□□ 0.92
TIMP1P01033 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TIMP1P01033 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TIMP1P01033 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TIMP1P01033 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.76■□□□□ 0.91
TIMP1P01033 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TIMP1P01033 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TIMP1P01033 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC20.76■□□□□ 0.91
TIMP1P01033 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
TIMP1P01033 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.76■□□□□ 0.91
TIMP1P01033 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.76■□□□□ 0.91
TIMP1P01033 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TIMP1P01033 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TIMP1P01033 AL662844.1-201ENST00000546340 181 ntBASIC20.76■□□□□ 0.91
TIMP1P01033 AL136038.4-201ENST00000603606 1261 ntBASIC20.76■□□□□ 0.91
TIMP1P01033 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.76■□□□□ 0.91
TIMP1P01033 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.76■□□□□ 0.91
TIMP1P01033 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TIMP1P01033 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
TIMP1P01033 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TIMP1P01033 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TIMP1P01033 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TIMP1P01033 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TIMP1P01033 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TIMP1P01033 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.75■□□□□ 0.91
TIMP1P01033 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TIMP1P01033 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.75■□□□□ 0.91
TIMP1P01033 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TIMP1P01033 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
TIMP1P01033 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TIMP1P01033 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TIMP1P01033 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.75■□□□□ 0.91
TIMP1P01033 AL023284.2-201ENST00000405850 579 ntBASIC20.75■□□□□ 0.91
TIMP1P01033 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
TIMP1P01033 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.75■□□□□ 0.91
TIMP1P01033 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC20.75■□□□□ 0.91
TIMP1P01033 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.75■□□□□ 0.91
TIMP1P01033 AC079776.4-201ENST00000511039 504 ntBASIC20.75■□□□□ 0.91
TIMP1P01033 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TIMP1P01033 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.75■□□□□ 0.91
TIMP1P01033 AL157888.1-201ENST00000631930 593 ntBASIC20.75■□□□□ 0.91
TIMP1P01033 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
TIMP1P01033 AL391807.1-203ENST00000604392 2365 ntBASIC20.75■□□□□ 0.91
TIMP1P01033 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.75■□□□□ 0.91
TIMP1P01033 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
TIMP1P01033 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
TIMP1P01033 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TIMP1P01033 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.75■□□□□ 0.91
TIMP1P01033 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TIMP1P01033 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC20.74■□□□□ 0.91
TIMP1P01033 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TIMP1P01033 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TIMP1P01033 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TIMP1P01033 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TIMP1P01033 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
TIMP1P01033 TOB2P1-201ENST00000469761 992 ntBASIC20.74■□□□□ 0.91
TIMP1P01033 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
TIMP1P01033 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TIMP1P01033 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.74■□□□□ 0.91
TIMP1P01033 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.74■□□□□ 0.91
TIMP1P01033 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.74■□□□□ 0.91
TIMP1P01033 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms