Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
MBD4O95243 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
MBD4O95243 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
MBD4O95243 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
MBD4O95243 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC22.93■■□□□ 1.26
MBD4O95243 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC22.93■■□□□ 1.26
MBD4O95243 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC22.93■■□□□ 1.26
MBD4O95243 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC22.93■■□□□ 1.26
MBD4O95243 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
MBD4O95243 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
MBD4O95243 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
MBD4O95243 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
MBD4O95243 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC22.92■■□□□ 1.26
MBD4O95243 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC22.92■■□□□ 1.26
MBD4O95243 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
MBD4O95243 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC22.92■■□□□ 1.26
MBD4O95243 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC22.92■■□□□ 1.26
MBD4O95243 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC22.92■■□□□ 1.26
MBD4O95243 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
MBD4O95243 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
MBD4O95243 ECEL1P2-202ENST00000465689 757 ntBASIC22.92■■□□□ 1.26
MBD4O95243 TMA16-209ENST00000513272 803 ntTSL 2 BASIC22.92■■□□□ 1.26
MBD4O95243 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.92■■□□□ 1.26
MBD4O95243 PPOX-219ENST00000544598 813 ntTSL 2 BASIC22.92■■□□□ 1.26
MBD4O95243 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.92■■□□□ 1.26
MBD4O95243 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
MBD4O95243 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
MBD4O95243 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC22.92■■□□□ 1.26
MBD4O95243 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
MBD4O95243 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
MBD4O95243 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC22.92■■□□□ 1.26
MBD4O95243 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC22.92■■□□□ 1.26
MBD4O95243 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
MBD4O95243 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MBD4O95243 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MBD4O95243 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
MBD4O95243 KRT18P22-201ENST00000402024 1347 ntBASIC22.91■■□□□ 1.26
MBD4O95243 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.91■■□□□ 1.26
MBD4O95243 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MBD4O95243 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MBD4O95243 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
MBD4O95243 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC22.91■■□□□ 1.26
MBD4O95243 TSPY21P-201ENST00000433481 731 ntBASIC22.91■■□□□ 1.26
MBD4O95243 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
MBD4O95243 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
MBD4O95243 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MBD4O95243 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.91■■□□□ 1.26
MBD4O95243 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC22.91■■□□□ 1.26
MBD4O95243 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC22.91■■□□□ 1.26
MBD4O95243 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MBD4O95243 AC007952.6-201ENST00000573168 2673 ntBASIC22.91■■□□□ 1.26
MBD4O95243 AC003957.1-201ENST00000625108 2673 ntBASIC22.91■■□□□ 1.26
MBD4O95243 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.91■■□□□ 1.26
MBD4O95243 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
MBD4O95243 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
MBD4O95243 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC22.91■■□□□ 1.26
MBD4O95243 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
MBD4O95243 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
MBD4O95243 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
MBD4O95243 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC22.9■■□□□ 1.26
MBD4O95243 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC22.9■■□□□ 1.26
MBD4O95243 GOLGA6L5P-202ENST00000515341 1828 ntBASIC22.9■■□□□ 1.26
MBD4O95243 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC22.9■■□□□ 1.26
MBD4O95243 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
MBD4O95243 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC22.9■■□□□ 1.26
MBD4O95243 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
MBD4O95243 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC22.9■■□□□ 1.26
MBD4O95243 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
MBD4O95243 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC22.9■■□□□ 1.26
MBD4O95243 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC22.9■■□□□ 1.26
MBD4O95243 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
MBD4O95243 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC22.9■■□□□ 1.26
MBD4O95243 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
MBD4O95243 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.9■■□□□ 1.26
MBD4O95243 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC22.9■■□□□ 1.26
MBD4O95243 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC22.9■■□□□ 1.26
MBD4O95243 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC22.89■■□□□ 1.26
MBD4O95243 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22.89■■□□□ 1.26
MBD4O95243 AC093484.2-201ENST00000580996 2166 ntBASIC22.89■■□□□ 1.26
MBD4O95243 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC22.89■■□□□ 1.26
MBD4O95243 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
MBD4O95243 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC22.89■■□□□ 1.25
MBD4O95243 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
MBD4O95243 RCN1P1-201ENST00000400413 996 ntBASIC22.89■■□□□ 1.25
MBD4O95243 KRT18P21-201ENST00000515767 1272 ntBASIC22.89■■□□□ 1.25
MBD4O95243 FAM87A-204ENST00000613235 858 ntBASIC22.89■■□□□ 1.25
MBD4O95243 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
MBD4O95243 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
MBD4O95243 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC22.89■■□□□ 1.25
MBD4O95243 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
MBD4O95243 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
MBD4O95243 TEX21P-204ENST00000641479 1693 ntBASIC22.88■■□□□ 1.25
MBD4O95243 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
MBD4O95243 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC22.88■■□□□ 1.25
MBD4O95243 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC22.88■■□□□ 1.25
MBD4O95243 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.88■■□□□ 1.25
MBD4O95243 SLC25A1P2-201ENST00000430693 912 ntBASIC22.88■■□□□ 1.25
MBD4O95243 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC22.88■■□□□ 1.25
MBD4O95243 AL023803.3-201ENST00000615559 522 ntBASIC22.88■■□□□ 1.25
MBD4O95243 AC005363.2-201ENST00000618631 242 ntBASIC22.88■■□□□ 1.25
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms