Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
PCF11O94913 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC29.98■■■□□ 2.39
PCF11O94913 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC29.98■■■□□ 2.39
PCF11O94913 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC29.98■■■□□ 2.39
PCF11O94913 AC125437.2-201ENST00000625180 2167 ntBASIC29.98■■■□□ 2.39
PCF11O94913 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
PCF11O94913 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC29.98■■■□□ 2.39
PCF11O94913 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC29.98■■■□□ 2.39
PCF11O94913 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
PCF11O94913 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
PCF11O94913 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.39
PCF11O94913 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
PCF11O94913 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC29.98■■■□□ 2.39
PCF11O94913 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC29.98■■■□□ 2.39
PCF11O94913 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC29.98■■■□□ 2.39
PCF11O94913 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
PCF11O94913 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
PCF11O94913 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.39
PCF11O94913 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC29.98■■■□□ 2.39
PCF11O94913 HYMAI.1-201ENST00000620949 238 ntBASIC29.98■■■□□ 2.39
PCF11O94913 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
PCF11O94913 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
PCF11O94913 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC29.97■■■□□ 2.39
PCF11O94913 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC29.97■■■□□ 2.39
PCF11O94913 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC29.97■■■□□ 2.39
PCF11O94913 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
PCF11O94913 TREX1-205ENST00000625293 1783 ntBASIC29.97■■■□□ 2.39
PCF11O94913 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC29.97■■■□□ 2.39
PCF11O94913 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
PCF11O94913 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
PCF11O94913 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
PCF11O94913 GCSHP2-201ENST00000560971 527 ntBASIC29.97■■■□□ 2.39
PCF11O94913 AC006538.3-201ENST00000612495 578 ntBASIC29.97■■■□□ 2.39
PCF11O94913 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC29.97■■■□□ 2.39
PCF11O94913 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
PCF11O94913 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC29.96■■■□□ 2.39
PCF11O94913 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
PCF11O94913 EFS-203ENST00000429593 2610 ntTSL 2 BASIC29.96■■■□□ 2.39
PCF11O94913 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC29.96■■■□□ 2.39
PCF11O94913 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC29.96■■■□□ 2.39
PCF11O94913 STARP1-201ENST00000397973 869 ntBASIC29.96■■■□□ 2.39
PCF11O94913 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC29.96■■■□□ 2.39
PCF11O94913 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC29.96■■■□□ 2.39
PCF11O94913 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC29.96■■■□□ 2.39
PCF11O94913 AL691432.3-201ENST00000621860 400 ntBASIC29.96■■■□□ 2.39
PCF11O94913 DFFB-212ENST00000625756 649 ntTSL 5 BASIC29.96■■■□□ 2.39
PCF11O94913 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC29.96■■■□□ 2.39
PCF11O94913 TP73-202ENST00000354437 2140 ntTSL 5 BASIC29.96■■■□□ 2.39
PCF11O94913 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC29.96■■■□□ 2.39
PCF11O94913 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC29.96■■■□□ 2.39
PCF11O94913 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC29.96■■■□□ 2.39
PCF11O94913 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
PCF11O94913 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
PCF11O94913 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC29.95■■■□□ 2.39
PCF11O94913 PCED1CP-201ENST00000419887 785 ntBASIC29.95■■■□□ 2.39
PCF11O94913 HCG4P8-203ENST00000443049 980 ntBASIC29.95■■■□□ 2.39
PCF11O94913 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC29.95■■■□□ 2.39
PCF11O94913 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC29.95■■■□□ 2.39
PCF11O94913 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC29.95■■■□□ 2.39
PCF11O94913 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC29.95■■■□□ 2.39
PCF11O94913 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC29.95■■■□□ 2.39
PCF11O94913 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
PCF11O94913 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC29.95■■■□□ 2.39
PCF11O94913 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC29.95■■■□□ 2.39
PCF11O94913 Z82202.1-201ENST00000623446 1880 ntBASIC29.95■■■□□ 2.39
PCF11O94913 LINC01521-201ENST00000504184 1943 ntBASIC29.95■■■□□ 2.39
PCF11O94913 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC29.95■■■□□ 2.39
PCF11O94913 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.38
PCF11O94913 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC29.95■■■□□ 2.38
PCF11O94913 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC29.95■■■□□ 2.38
PCF11O94913 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
PCF11O94913 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
PCF11O94913 SNX5-210ENST00000481323 562 ntTSL 3 BASIC29.94■■■□□ 2.38
PCF11O94913 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC29.94■■■□□ 2.38
PCF11O94913 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC29.94■■■□□ 2.38
PCF11O94913 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC29.94■■■□□ 2.38
PCF11O94913 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
PCF11O94913 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
PCF11O94913 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC29.94■■■□□ 2.38
PCF11O94913 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
PCF11O94913 AP000593.1-201ENST00000393668 712 ntBASIC29.94■■■□□ 2.38
PCF11O94913 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC29.94■■■□□ 2.38
PCF11O94913 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC29.94■■■□□ 2.38
PCF11O94913 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC29.94■■■□□ 2.38
PCF11O94913 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC29.94■■■□□ 2.38
PCF11O94913 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC29.94■■■□□ 2.38
PCF11O94913 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC29.94■■■□□ 2.38
PCF11O94913 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC29.94■■■□□ 2.38
PCF11O94913 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC29.94■■■□□ 2.38
PCF11O94913 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
PCF11O94913 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
PCF11O94913 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC29.93■■■□□ 2.38
PCF11O94913 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
PCF11O94913 PWWP2AP1-201ENST00000429776 2273 ntBASIC29.93■■■□□ 2.38
PCF11O94913 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC29.93■■■□□ 2.38
PCF11O94913 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
PCF11O94913 IER3-202ENST00000376377 1350 ntBASIC29.93■■■□□ 2.38
PCF11O94913 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
PCF11O94913 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
PCF11O94913 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC29.93■■■□□ 2.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms