Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.22■□□□□ 0.67
GPC4O75487 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GPC4O75487 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.22■□□□□ 0.67
GPC4O75487 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPC4O75487 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.22■□□□□ 0.67
GPC4O75487 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GPC4O75487 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GPC4O75487 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
GPC4O75487 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GPC4O75487 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.22■□□□□ 0.67
GPC4O75487 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
GPC4O75487 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
GPC4O75487 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
GPC4O75487 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GPC4O75487 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
GPC4O75487 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.21■□□□□ 0.67
GPC4O75487 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.21■□□□□ 0.67
GPC4O75487 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC19.21■□□□□ 0.67
GPC4O75487 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC4O75487 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC4O75487 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC4O75487 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
GPC4O75487 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC4O75487 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC4O75487 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC4O75487 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC19.21■□□□□ 0.67
GPC4O75487 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.21■□□□□ 0.67
GPC4O75487 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.21■□□□□ 0.67
GPC4O75487 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC4O75487 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GPC4O75487 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GPC4O75487 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
GPC4O75487 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
GPC4O75487 AL023875.1-201ENST00000640777 796 ntBASIC19.21■□□□□ 0.67
GPC4O75487 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC4O75487 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC4O75487 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC4O75487 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC4O75487 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC19.21■□□□□ 0.67
GPC4O75487 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
GPC4O75487 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC4O75487 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC4O75487 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
GPC4O75487 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GPC4O75487 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC19.2■□□□□ 0.66
GPC4O75487 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GPC4O75487 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.2■□□□□ 0.66
GPC4O75487 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GPC4O75487 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GPC4O75487 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GPC4O75487 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
GPC4O75487 ABHD17AP1-201ENST00000358206 933 ntBASIC19.2■□□□□ 0.66
GPC4O75487 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GPC4O75487 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.2■□□□□ 0.66
GPC4O75487 AC133681.1-201ENST00000465482 601 ntBASIC19.2■□□□□ 0.66
GPC4O75487 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
GPC4O75487 KRT18P16-201ENST00000510337 1294 ntBASIC19.2■□□□□ 0.66
GPC4O75487 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.2■□□□□ 0.66
GPC4O75487 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
GPC4O75487 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.2■□□□□ 0.66
GPC4O75487 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GPC4O75487 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
GPC4O75487 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC19.2■□□□□ 0.66
GPC4O75487 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GPC4O75487 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GPC4O75487 NBPF21P-201ENST00000425093 1451 ntBASIC19.2■□□□□ 0.66
GPC4O75487 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
GPC4O75487 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
GPC4O75487 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.2■□□□□ 0.66
GPC4O75487 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
GPC4O75487 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.19■□□□□ 0.66
GPC4O75487 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.19■□□□□ 0.66
GPC4O75487 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
GPC4O75487 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
GPC4O75487 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
GPC4O75487 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.19■□□□□ 0.66
GPC4O75487 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
GPC4O75487 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
GPC4O75487 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.19■□□□□ 0.66
GPC4O75487 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
GPC4O75487 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC19.19■□□□□ 0.66
GPC4O75487 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.19■□□□□ 0.66
GPC4O75487 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.19■□□□□ 0.66
GPC4O75487 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.19■□□□□ 0.66
GPC4O75487 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
GPC4O75487 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.19■□□□□ 0.66
GPC4O75487 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
GPC4O75487 AC124016.1-201ENST00000609552 612 ntBASIC19.19■□□□□ 0.66
GPC4O75487 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
GPC4O75487 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GPC4O75487 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.19■□□□□ 0.66
GPC4O75487 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.19■□□□□ 0.66
GPC4O75487 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
GPC4O75487 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.19■□□□□ 0.66
GPC4O75487 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.19■□□□□ 0.66
GPC4O75487 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.19■□□□□ 0.66
GPC4O75487 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.19■□□□□ 0.66
GPC4O75487 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC19.19■□□□□ 0.66
GPC4O75487 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
GPC4O75487 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms