Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC8.58□□□□□ -1.04
USH2AO75445 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
USH2AO75445 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
USH2AO75445 RPS8P6-201ENST00000426177 609 ntBASIC8.58□□□□□ -1.04
USH2AO75445 AC034232.1-201ENST00000506026 1064 ntBASIC8.58□□□□□ -1.04
USH2AO75445 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC8.58□□□□□ -1.04
USH2AO75445 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC8.58□□□□□ -1.04
USH2AO75445 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC8.58□□□□□ -1.04
USH2AO75445 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC8.58□□□□□ -1.04
USH2AO75445 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
USH2AO75445 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
USH2AO75445 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC8.58□□□□□ -1.04
USH2AO75445 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
USH2AO75445 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC8.58□□□□□ -1.04
USH2AO75445 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC8.58□□□□□ -1.04
USH2AO75445 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
USH2AO75445 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
USH2AO75445 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
USH2AO75445 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
USH2AO75445 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC8.58□□□□□ -1.04
USH2AO75445 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC8.58□□□□□ -1.04
USH2AO75445 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
USH2AO75445 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC8.58□□□□□ -1.04
USH2AO75445 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC8.58□□□□□ -1.04
USH2AO75445 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
USH2AO75445 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
USH2AO75445 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC8.58□□□□□ -1.04
USH2AO75445 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC8.58□□□□□ -1.04
USH2AO75445 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC8.58□□□□□ -1.04
USH2AO75445 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
USH2AO75445 HNRNPDP1-201ENST00000439535 754 ntBASIC8.58□□□□□ -1.04
USH2AO75445 FAM197Y8-203ENST00000450145 560 ntBASIC8.58□□□□□ -1.04
USH2AO75445 GLRB-205ENST00000512619 728 ntTSL 3 BASIC8.58□□□□□ -1.04
USH2AO75445 AC074051.2-201ENST00000565115 352 ntBASIC8.58□□□□□ -1.04
USH2AO75445 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC8.58□□□□□ -1.04
USH2AO75445 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
USH2AO75445 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC8.58□□□□□ -1.04
USH2AO75445 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC8.58□□□□□ -1.04
USH2AO75445 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC8.58□□□□□ -1.04
USH2AO75445 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC8.58□□□□□ -1.04
USH2AO75445 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC8.58□□□□□ -1.04
USH2AO75445 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC8.58□□□□□ -1.04
USH2AO75445 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC8.57□□□□□ -1.04
USH2AO75445 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC8.57□□□□□ -1.04
USH2AO75445 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC8.57□□□□□ -1.04
USH2AO75445 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC8.57□□□□□ -1.04
USH2AO75445 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC8.57□□□□□ -1.04
USH2AO75445 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC8.57□□□□□ -1.04
USH2AO75445 AC007274.1-201ENST00000439805 662 ntBASIC8.57□□□□□ -1.04
USH2AO75445 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC8.57□□□□□ -1.04
USH2AO75445 AC018712.1-201ENST00000455767 687 ntBASIC8.57□□□□□ -1.04
USH2AO75445 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC8.57□□□□□ -1.04
USH2AO75445 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC8.57□□□□□ -1.04
USH2AO75445 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC8.57□□□□□ -1.04
USH2AO75445 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC8.57□□□□□ -1.04
USH2AO75445 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC8.57□□□□□ -1.04
USH2AO75445 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC8.57□□□□□ -1.04
USH2AO75445 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 NSUN5P1-202ENST00000421140 1535 ntBASIC8.57□□□□□ -1.04
USH2AO75445 NSUN5P2-203ENST00000457352 1529 ntBASIC8.57□□□□□ -1.04
USH2AO75445 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC8.57□□□□□ -1.04
USH2AO75445 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC8.57□□□□□ -1.04
USH2AO75445 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC8.57□□□□□ -1.04
USH2AO75445 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC8.57□□□□□ -1.04
USH2AO75445 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC8.57□□□□□ -1.04
USH2AO75445 AL591684.3-201ENST00000605187 298 ntBASIC8.57□□□□□ -1.04
USH2AO75445 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
USH2AO75445 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC8.57□□□□□ -1.04
USH2AO75445 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC8.57□□□□□ -1.04
USH2AO75445 GK-202ENST00000378941 458 ntTSL 3 BASIC8.57□□□□□ -1.04
USH2AO75445 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC8.57□□□□□ -1.04
USH2AO75445 MED15P5-201ENST00000423150 992 ntBASIC8.57□□□□□ -1.04
USH2AO75445 BCRP1-201ENST00000444246 691 ntBASIC8.57□□□□□ -1.04
USH2AO75445 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC8.57□□□□□ -1.04
USH2AO75445 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC8.57□□□□□ -1.04
USH2AO75445 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC8.57□□□□□ -1.04
USH2AO75445 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC8.57□□□□□ -1.04
USH2AO75445 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC8.57□□□□□ -1.04
USH2AO75445 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC8.57□□□□□ -1.04
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms