Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM3O75382 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TRIM3O75382 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC17.89■□□□□ 0.45
TRIM3O75382 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRIM3O75382 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRIM3O75382 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM3O75382 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM3O75382 FDX2-207ENST00000494368 584 ntTSL 4 BASIC17.89■□□□□ 0.45
TRIM3O75382 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM3O75382 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM3O75382 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM3O75382 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM3O75382 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM3O75382 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM3O75382 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM3O75382 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.89■□□□□ 0.45
TRIM3O75382 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM3O75382 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.89■□□□□ 0.45
TRIM3O75382 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM3O75382 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM3O75382 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM3O75382 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRIM3O75382 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM3O75382 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM3O75382 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM3O75382 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM3O75382 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM3O75382 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TRIM3O75382 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM3O75382 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM3O75382 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRIM3O75382 SAPCD2P4-201ENST00000424595 1171 ntBASIC17.88■□□□□ 0.45
TRIM3O75382 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM3O75382 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM3O75382 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM3O75382 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC17.88■□□□□ 0.45
TRIM3O75382 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM3O75382 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM3O75382 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM3O75382 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.88■□□□□ 0.45
TRIM3O75382 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
TRIM3O75382 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM3O75382 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM3O75382 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRIM3O75382 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM3O75382 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM3O75382 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM3O75382 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM3O75382 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM3O75382 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM3O75382 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM3O75382 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM3O75382 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM3O75382 TUBB8P6-201ENST00000436895 1288 ntBASIC17.87■□□□□ 0.45
TRIM3O75382 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC17.87■□□□□ 0.45
TRIM3O75382 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM3O75382 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM3O75382 C1QL1P1-201ENST00000568105 661 ntBASIC17.87■□□□□ 0.45
TRIM3O75382 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.87■□□□□ 0.45
TRIM3O75382 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM3O75382 AC073195.1-201ENST00000607241 877 ntBASIC17.87■□□□□ 0.45
TRIM3O75382 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM3O75382 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM3O75382 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
TRIM3O75382 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM3O75382 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM3O75382 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM3O75382 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM3O75382 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM3O75382 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRIM3O75382 AC009237.14-201ENST00000609975 1594 ntBASIC17.87■□□□□ 0.45
TRIM3O75382 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.87■□□□□ 0.45
TRIM3O75382 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
TRIM3O75382 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM3O75382 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM3O75382 AC005082.1-201ENST00000413042 2259 ntBASIC17.86■□□□□ 0.45
TRIM3O75382 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM3O75382 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM3O75382 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM3O75382 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM3O75382 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM3O75382 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.86■□□□□ 0.45
TRIM3O75382 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.86■□□□□ 0.45
TRIM3O75382 TSPY7P-201ENST00000431358 1114 ntBASIC17.86■□□□□ 0.45
TRIM3O75382 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRIM3O75382 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM3O75382 AP002982.1-201ENST00000492365 877 ntBASIC17.86■□□□□ 0.45
TRIM3O75382 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.86■□□□□ 0.45
TRIM3O75382 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.86■□□□□ 0.45
TRIM3O75382 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM3O75382 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM3O75382 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM3O75382 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM3O75382 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM3O75382 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.86■□□□□ 0.45
TRIM3O75382 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM3O75382 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM3O75382 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM3O75382 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRIM3O75382 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms