Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.21■□□□□ 0.34
PFDN1O60925 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
PFDN1O60925 LINC00554-201ENST00000564841 3011 ntBASIC17.21■□□□□ 0.34
PFDN1O60925 AL645608.8-201ENST00000606034 2086 ntBASIC17.2■□□□□ 0.34
PFDN1O60925 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
PFDN1O60925 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
PFDN1O60925 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PFDN1O60925 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.2■□□□□ 0.34
PFDN1O60925 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PFDN1O60925 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PFDN1O60925 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PFDN1O60925 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC17.2■□□□□ 0.34
PFDN1O60925 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC17.2■□□□□ 0.34
PFDN1O60925 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.2■□□□□ 0.34
PFDN1O60925 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PFDN1O60925 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.2■□□□□ 0.34
PFDN1O60925 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.2■□□□□ 0.34
PFDN1O60925 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.2■□□□□ 0.34
PFDN1O60925 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PFDN1O60925 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PFDN1O60925 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC17.19■□□□□ 0.34
PFDN1O60925 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PFDN1O60925 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PFDN1O60925 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PFDN1O60925 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PFDN1O60925 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
PFDN1O60925 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.19■□□□□ 0.34
PFDN1O60925 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PFDN1O60925 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.19■□□□□ 0.34
PFDN1O60925 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PFDN1O60925 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PFDN1O60925 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PFDN1O60925 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PFDN1O60925 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PFDN1O60925 AC004448.1-201ENST00000458332 883 ntBASIC17.19■□□□□ 0.34
PFDN1O60925 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.19■□□□□ 0.34
PFDN1O60925 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.19■□□□□ 0.34
PFDN1O60925 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
PFDN1O60925 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PFDN1O60925 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PFDN1O60925 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.19■□□□□ 0.34
PFDN1O60925 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PFDN1O60925 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PFDN1O60925 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PFDN1O60925 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PFDN1O60925 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
PFDN1O60925 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PFDN1O60925 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PFDN1O60925 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PFDN1O60925 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC17.18■□□□□ 0.34
PFDN1O60925 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC17.18■□□□□ 0.34
PFDN1O60925 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PFDN1O60925 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.18■□□□□ 0.34
PFDN1O60925 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PFDN1O60925 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.18■□□□□ 0.34
PFDN1O60925 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PFDN1O60925 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PFDN1O60925 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PFDN1O60925 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PFDN1O60925 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PFDN1O60925 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PFDN1O60925 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PFDN1O60925 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.18■□□□□ 0.34
PFDN1O60925 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PFDN1O60925 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PFDN1O60925 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.18■□□□□ 0.34
PFDN1O60925 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PFDN1O60925 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.18■□□□□ 0.34
PFDN1O60925 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
PFDN1O60925 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PFDN1O60925 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
PFDN1O60925 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
PFDN1O60925 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PFDN1O60925 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PFDN1O60925 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
PFDN1O60925 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
PFDN1O60925 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC17.18■□□□□ 0.34
PFDN1O60925 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms