Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRIM13O60858 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM13O60858 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM13O60858 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.9■□□□□ 0.62
TRIM13O60858 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM13O60858 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM13O60858 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC18.9■□□□□ 0.62
TRIM13O60858 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
TRIM13O60858 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
TRIM13O60858 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
TRIM13O60858 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
TRIM13O60858 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM13O60858 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
TRIM13O60858 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM13O60858 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM13O60858 UBQLN4P1-201ENST00000461599 1801 ntBASIC18.89■□□□□ 0.61
TRIM13O60858 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM13O60858 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM13O60858 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.89■□□□□ 0.61
TRIM13O60858 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.89■□□□□ 0.61
TRIM13O60858 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TRIM13O60858 MAX-217ENST00000557277 728 ntTSL 3 BASIC18.89■□□□□ 0.61
TRIM13O60858 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM13O60858 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM13O60858 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM13O60858 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM13O60858 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM13O60858 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.89■□□□□ 0.61
TRIM13O60858 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM13O60858 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM13O60858 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.89■□□□□ 0.61
TRIM13O60858 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM13O60858 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM13O60858 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
TRIM13O60858 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
TRIM13O60858 AL390961.4-201ENST00000623958 2535 ntBASIC18.89■□□□□ 0.61
TRIM13O60858 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM13O60858 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM13O60858 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRIM13O60858 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
TRIM13O60858 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRIM13O60858 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
TRIM13O60858 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM13O60858 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM13O60858 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM13O60858 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM13O60858 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRIM13O60858 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM13O60858 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
TRIM13O60858 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM13O60858 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM13O60858 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
TRIM13O60858 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM13O60858 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.88■□□□□ 0.61
TRIM13O60858 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM13O60858 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.88■□□□□ 0.61
TRIM13O60858 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
TRIM13O60858 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.88■□□□□ 0.61
TRIM13O60858 AL050303.2-201ENST00000619798 666 ntBASIC18.88■□□□□ 0.61
TRIM13O60858 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM13O60858 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRIM13O60858 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRIM13O60858 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRIM13O60858 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
TRIM13O60858 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.88■□□□□ 0.61
TRIM13O60858 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
TRIM13O60858 FEM1AP3-201ENST00000403722 1741 ntBASIC18.88■□□□□ 0.61
TRIM13O60858 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM13O60858 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM13O60858 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
TRIM13O60858 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
TRIM13O60858 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.88■□□□□ 0.61
TRIM13O60858 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.88■□□□□ 0.61
TRIM13O60858 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM13O60858 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM13O60858 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM13O60858 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM13O60858 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM13O60858 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM13O60858 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM13O60858 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM13O60858 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM13O60858 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM13O60858 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM13O60858 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM13O60858 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM13O60858 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM13O60858 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
TRIM13O60858 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
TRIM13O60858 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM13O60858 AC080038.1-201ENST00000611274 1154 ntBASIC18.87■□□□□ 0.61
TRIM13O60858 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.87■□□□□ 0.61
TRIM13O60858 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.87■□□□□ 0.61
TRIM13O60858 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
TRIM13O60858 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM13O60858 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM13O60858 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM13O60858 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TRIM13O60858 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.86■□□□□ 0.61
TRIM13O60858 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms