Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP2AO43633 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP2AO43633 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP2AO43633 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP2AO43633 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP2AO43633 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC21.61■■□□□ 1.05
CHMP2AO43633 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC21.61■■□□□ 1.05
CHMP2AO43633 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.61■■□□□ 1.05
CHMP2AO43633 GRAMD4P8-201ENST00000605465 1115 ntBASIC21.61■■□□□ 1.05
CHMP2AO43633 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CHMP2AO43633 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP2AO43633 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP2AO43633 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHMP2AO43633 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CHMP2AO43633 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.61■■□□□ 1.05
CHMP2AO43633 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CHMP2AO43633 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP2AO43633 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.6■■□□□ 1.05
CHMP2AO43633 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC21.6■■□□□ 1.05
CHMP2AO43633 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.6■■□□□ 1.05
CHMP2AO43633 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CHMP2AO43633 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.6■■□□□ 1.05
CHMP2AO43633 MFAP1P1-201ENST00000442257 1255 ntBASIC21.6■■□□□ 1.05
CHMP2AO43633 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.6■■□□□ 1.05
CHMP2AO43633 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CHMP2AO43633 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.6■■□□□ 1.05
CHMP2AO43633 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
CHMP2AO43633 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
CHMP2AO43633 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP2AO43633 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP2AO43633 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP2AO43633 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP2AO43633 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC21.6■■□□□ 1.05
CHMP2AO43633 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHMP2AO43633 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.6■■□□□ 1.05
CHMP2AO43633 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC21.59■■□□□ 1.05
CHMP2AO43633 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHMP2AO43633 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHMP2AO43633 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHMP2AO43633 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHMP2AO43633 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC21.59■■□□□ 1.05
CHMP2AO43633 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.59■■□□□ 1.05
CHMP2AO43633 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
CHMP2AO43633 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.59■■□□□ 1.05
CHMP2AO43633 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC21.59■■□□□ 1.05
CHMP2AO43633 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHMP2AO43633 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.59■■□□□ 1.05
CHMP2AO43633 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.59■■□□□ 1.05
CHMP2AO43633 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHMP2AO43633 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CHMP2AO43633 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHMP2AO43633 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.58■■□□□ 1.05
CHMP2AO43633 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHMP2AO43633 SLC25A24-204ENST00000569674 2357 ntBASIC21.58■■□□□ 1.05
CHMP2AO43633 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHMP2AO43633 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC21.58■■□□□ 1.05
CHMP2AO43633 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CHMP2AO43633 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC21.58■■□□□ 1.05
CHMP2AO43633 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CHMP2AO43633 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.58■■□□□ 1.05
CHMP2AO43633 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC21.58■■□□□ 1.05
CHMP2AO43633 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHMP2AO43633 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CHMP2AO43633 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHMP2AO43633 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHMP2AO43633 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHMP2AO43633 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CHMP2AO43633 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHMP2AO43633 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC21.57■■□□□ 1.04
CHMP2AO43633 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2AO43633 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.57■■□□□ 1.04
CHMP2AO43633 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.57■■□□□ 1.04
CHMP2AO43633 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.57■■□□□ 1.04
CHMP2AO43633 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC21.57■■□□□ 1.04
CHMP2AO43633 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2AO43633 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2AO43633 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2AO43633 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC21.57■■□□□ 1.04
CHMP2AO43633 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2AO43633 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.57■■□□□ 1.04
CHMP2AO43633 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC21.57■■□□□ 1.04
CHMP2AO43633 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.57■■□□□ 1.04
CHMP2AO43633 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2AO43633 AP005242.2-201ENST00000580065 1175 ntBASIC21.57■■□□□ 1.04
CHMP2AO43633 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2AO43633 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2AO43633 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2AO43633 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2AO43633 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2AO43633 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2AO43633 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
CHMP2AO43633 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC21.57■■□□□ 1.04
CHMP2AO43633 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC21.56■■□□□ 1.04
CHMP2AO43633 KRT8P11-201ENST00000409686 1436 ntBASIC21.56■■□□□ 1.04
CHMP2AO43633 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHMP2AO43633 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CHMP2AO43633 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CHMP2AO43633 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC21.56■■□□□ 1.04
CHMP2AO43633 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC21.56■■□□□ 1.04
CHMP2AO43633 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms