Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
SNAI2O43623 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
SNAI2O43623 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
SNAI2O43623 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
SNAI2O43623 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.33□□□□□ -0.12
SNAI2O43623 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
SNAI2O43623 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
SNAI2O43623 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNAI2O43623 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SNAI2O43623 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SNAI2O43623 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
SNAI2O43623 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNAI2O43623 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNAI2O43623 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNAI2O43623 UQCRFS1P1-201ENST00000435169 820 ntBASIC14.33□□□□□ -0.12
SNAI2O43623 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNAI2O43623 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC14.33□□□□□ -0.12
SNAI2O43623 MFSD11-216ENST00000590393 1141 ntBASIC14.33□□□□□ -0.12
SNAI2O43623 AC016405.3-201ENST00000607710 860 ntBASIC14.33□□□□□ -0.12
SNAI2O43623 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNAI2O43623 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNAI2O43623 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
SNAI2O43623 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
SNAI2O43623 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
SNAI2O43623 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
SNAI2O43623 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC14.32□□□□□ -0.12
SNAI2O43623 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC14.32□□□□□ -0.12
SNAI2O43623 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.32□□□□□ -0.12
SNAI2O43623 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.32□□□□□ -0.12
SNAI2O43623 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 AC099398.1-201ENST00000567919 2776 ntBASIC14.32□□□□□ -0.12
SNAI2O43623 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SNAI2O43623 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
SNAI2O43623 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC14.32□□□□□ -0.12
SNAI2O43623 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC14.32□□□□□ -0.12
SNAI2O43623 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC14.32□□□□□ -0.12
SNAI2O43623 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SNAI2O43623 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SNAI2O43623 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
SNAI2O43623 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
SNAI2O43623 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.32□□□□□ -0.12
SNAI2O43623 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.32□□□□□ -0.12
SNAI2O43623 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
SNAI2O43623 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
SNAI2O43623 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
SNAI2O43623 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNAI2O43623 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNAI2O43623 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNAI2O43623 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNAI2O43623 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNAI2O43623 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNAI2O43623 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
SNAI2O43623 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC14.31□□□□□ -0.12
SNAI2O43623 AC139713.2-201ENST00000641328 2723 ntBASIC14.31□□□□□ -0.12
SNAI2O43623 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNAI2O43623 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNAI2O43623 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SNAI2O43623 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNAI2O43623 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNAI2O43623 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNAI2O43623 AC005837.3-201ENST00000612163 286 ntBASIC14.31□□□□□ -0.12
SNAI2O43623 SP2-202ENST00000613139 908 ntTSL 5 BASIC14.31□□□□□ -0.12
SNAI2O43623 AC013268.1-206ENST00000638368 961 ntBASIC14.31□□□□□ -0.12
SNAI2O43623 AC112229.1-201ENST00000639295 961 ntBASIC14.31□□□□□ -0.12
SNAI2O43623 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNAI2O43623 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNAI2O43623 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
SNAI2O43623 AL161938.1-201ENST00000569833 2180 ntBASIC14.31□□□□□ -0.12
SNAI2O43623 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
SNAI2O43623 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNAI2O43623 AC008894.3-201ENST00000624324 3103 ntBASIC14.31□□□□□ -0.12
SNAI2O43623 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
SNAI2O43623 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms