Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXA2O43364 LINC01311-201ENST00000565162 1445 ntBASIC20.53■□□□□ 0.88
HOXA2O43364 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXA2O43364 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA2O43364 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA2O43364 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXA2O43364 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA2O43364 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.53■□□□□ 0.88
HOXA2O43364 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXA2O43364 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXA2O43364 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC20.53■□□□□ 0.88
HOXA2O43364 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXA2O43364 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
HOXA2O43364 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXA2O43364 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA2O43364 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXA2O43364 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA2O43364 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA2O43364 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXA2O43364 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HOXA2O43364 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA2O43364 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA2O43364 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA2O43364 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA2O43364 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXA2O43364 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HOXA2O43364 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
HOXA2O43364 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXA2O43364 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXA2O43364 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HOXA2O43364 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXA2O43364 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.52■□□□□ 0.88
HOXA2O43364 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXA2O43364 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXA2O43364 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXA2O43364 KRT18P48-201ENST00000434763 852 ntBASIC20.52■□□□□ 0.88
HOXA2O43364 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
HOXA2O43364 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.52■□□□□ 0.88
HOXA2O43364 FGF14-AS2-201ENST00000606448 1074 ntBASIC20.52■□□□□ 0.88
HOXA2O43364 AC083849.1-201ENST00000615227 514 ntBASIC20.52■□□□□ 0.88
HOXA2O43364 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXA2O43364 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
HOXA2O43364 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.52■□□□□ 0.88
HOXA2O43364 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
HOXA2O43364 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
HOXA2O43364 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
HOXA2O43364 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.87
HOXA2O43364 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
HOXA2O43364 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA2O43364 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA2O43364 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA2O43364 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.51■□□□□ 0.87
HOXA2O43364 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA2O43364 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.51■□□□□ 0.87
HOXA2O43364 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
HOXA2O43364 TCF3P1-201ENST00000423021 1937 ntBASIC20.51■□□□□ 0.87
HOXA2O43364 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA2O43364 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA2O43364 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
HOXA2O43364 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA2O43364 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA2O43364 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA2O43364 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA2O43364 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA2O43364 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
HOXA2O43364 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA2O43364 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC20.51■□□□□ 0.87
HOXA2O43364 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.51■□□□□ 0.87
HOXA2O43364 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
HOXA2O43364 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
HOXA2O43364 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC20.51■□□□□ 0.87
HOXA2O43364 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.51■□□□□ 0.87
HOXA2O43364 HYMAI.1-201ENST00000620949 238 ntBASIC20.51■□□□□ 0.87
HOXA2O43364 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC20.51■□□□□ 0.87
HOXA2O43364 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA2O43364 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA2O43364 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.51■□□□□ 0.87
HOXA2O43364 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA2O43364 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.51■□□□□ 0.87
HOXA2O43364 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA2O43364 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.51■□□□□ 0.87
HOXA2O43364 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA2O43364 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA2O43364 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
HOXA2O43364 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA2O43364 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA2O43364 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA2O43364 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA2O43364 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC20.5■□□□□ 0.87
HOXA2O43364 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC20.5■□□□□ 0.87
HOXA2O43364 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.5■□□□□ 0.87
HOXA2O43364 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA2O43364 KRT126P-201ENST00000549467 1181 ntBASIC20.5■□□□□ 0.87
HOXA2O43364 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC20.5■□□□□ 0.87
HOXA2O43364 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.5■□□□□ 0.87
HOXA2O43364 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA2O43364 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
HOXA2O43364 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
HOXA2O43364 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.5■□□□□ 0.87
HOXA2O43364 AL137060.1-201ENST00000618151 2648 ntBASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms