Protein–RNA interactions for Protein: O15269

SPTLC1, Serine palmitoyltransferase 1, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1O15269 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPTLC1O15269 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPTLC1O15269 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.56■□□□□ 0.88
SPTLC1O15269 C2orf69P3-201ENST00000565542 1120 ntBASIC20.56■□□□□ 0.88
SPTLC1O15269 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.56■□□□□ 0.88
SPTLC1O15269 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.56■□□□□ 0.88
SPTLC1O15269 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.56■□□□□ 0.88
SPTLC1O15269 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPTLC1O15269 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.56■□□□□ 0.88
SPTLC1O15269 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SPTLC1O15269 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
SPTLC1O15269 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPTLC1O15269 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.56■□□□□ 0.88
SPTLC1O15269 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
SPTLC1O15269 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SPTLC1O15269 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
SPTLC1O15269 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPTLC1O15269 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPTLC1O15269 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPTLC1O15269 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.55■□□□□ 0.88
SPTLC1O15269 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SPTLC1O15269 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.55■□□□□ 0.88
SPTLC1O15269 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.55■□□□□ 0.88
SPTLC1O15269 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.55■□□□□ 0.88
SPTLC1O15269 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPTLC1O15269 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
SPTLC1O15269 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SPTLC1O15269 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.55■□□□□ 0.88
SPTLC1O15269 ECEL1P2-202ENST00000465689 757 ntBASIC20.55■□□□□ 0.88
SPTLC1O15269 EGLN1P1-201ENST00000531623 762 ntBASIC20.55■□□□□ 0.88
SPTLC1O15269 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.55■□□□□ 0.88
SPTLC1O15269 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
SPTLC1O15269 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.55■□□□□ 0.88
SPTLC1O15269 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPTLC1O15269 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPTLC1O15269 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPTLC1O15269 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SPTLC1O15269 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.55■□□□□ 0.88
SPTLC1O15269 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.55■□□□□ 0.88
SPTLC1O15269 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC1O15269 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC1O15269 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
SPTLC1O15269 KRT18P22-201ENST00000402024 1347 ntBASIC20.54■□□□□ 0.88
SPTLC1O15269 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC1O15269 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.54■□□□□ 0.88
SPTLC1O15269 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC1O15269 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.54■□□□□ 0.88
SPTLC1O15269 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC1O15269 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC1O15269 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.54■□□□□ 0.88
SPTLC1O15269 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.54■□□□□ 0.88
SPTLC1O15269 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC1O15269 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.54■□□□□ 0.88
SPTLC1O15269 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
SPTLC1O15269 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.54■□□□□ 0.88
SPTLC1O15269 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC1O15269 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC1O15269 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.54■□□□□ 0.88
SPTLC1O15269 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC1O15269 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC1O15269 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC1O15269 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC1O15269 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC1O15269 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC1O15269 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC1O15269 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.54■□□□□ 0.88
SPTLC1O15269 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SPTLC1O15269 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.53■□□□□ 0.88
SPTLC1O15269 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPTLC1O15269 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SPTLC1O15269 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.53■□□□□ 0.88
SPTLC1O15269 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPTLC1O15269 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SPTLC1O15269 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.53■□□□□ 0.88
SPTLC1O15269 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
SPTLC1O15269 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPTLC1O15269 P4HB-223ENST00000576390 439 ntTSL 4 BASIC20.53■□□□□ 0.88
SPTLC1O15269 FAM87A-204ENST00000613235 858 ntBASIC20.53■□□□□ 0.88
SPTLC1O15269 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPTLC1O15269 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.53■□□□□ 0.88
SPTLC1O15269 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.53■□□□□ 0.88
SPTLC1O15269 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SPTLC1O15269 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SPTLC1O15269 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPTLC1O15269 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPTLC1O15269 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SPTLC1O15269 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPTLC1O15269 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SPTLC1O15269 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPTLC1O15269 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SPTLC1O15269 AC005521.1-201ENST00000393351 872 ntBASIC20.52■□□□□ 0.88
SPTLC1O15269 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.52■□□□□ 0.88
SPTLC1O15269 TSPY23P-201ENST00000440136 739 ntBASIC20.52■□□□□ 0.88
SPTLC1O15269 SLC25A3P1-201ENST00000443844 931 ntBASIC20.52■□□□□ 0.88
SPTLC1O15269 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SPTLC1O15269 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.52■□□□□ 0.88
SPTLC1O15269 AL023803.3-201ENST00000615559 522 ntBASIC20.52■□□□□ 0.88
SPTLC1O15269 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPTLC1O15269 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SPTLC1O15269 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms