Protein–RNA interactions for Protein: O15178

T, Brachyury protein, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TO15178 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC17.69■□□□□ 0.42
TO15178 AC116562.4-201ENST00000641316 2276 ntBASIC17.69■□□□□ 0.42
TO15178 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TO15178 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TO15178 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TO15178 TEX21P-204ENST00000641479 1693 ntBASIC17.69■□□□□ 0.42
TO15178 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TO15178 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TO15178 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC17.69■□□□□ 0.42
TO15178 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.69■□□□□ 0.42
TO15178 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TO15178 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.69■□□□□ 0.42
TO15178 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.69■□□□□ 0.42
TO15178 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TO15178 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.69■□□□□ 0.42
TO15178 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
TO15178 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TO15178 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.69■□□□□ 0.42
TO15178 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
TO15178 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
TO15178 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TO15178 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
TO15178 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TO15178 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TO15178 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.69■□□□□ 0.42
TO15178 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.69■□□□□ 0.42
TO15178 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
TO15178 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TO15178 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
TO15178 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TO15178 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TO15178 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TO15178 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TO15178 AL596275.1-201ENST00000423464 877 ntBASIC17.68■□□□□ 0.42
TO15178 TSPY23P-201ENST00000440136 739 ntBASIC17.68■□□□□ 0.42
TO15178 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.68■□□□□ 0.42
TO15178 FAM207BP-201ENST00000447172 505 ntBASIC17.68■□□□□ 0.42
TO15178 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.68■□□□□ 0.42
TO15178 PRSS44-201ENST00000515154 1146 ntBASIC17.68■□□□□ 0.42
TO15178 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
TO15178 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
TO15178 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.68■□□□□ 0.42
TO15178 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.68■□□□□ 0.42
TO15178 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TO15178 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
TO15178 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
TO15178 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.67■□□□□ 0.42
TO15178 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TO15178 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TO15178 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TO15178 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TO15178 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TO15178 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TO15178 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TO15178 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TO15178 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TO15178 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
TO15178 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TO15178 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.67■□□□□ 0.42
TO15178 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
TO15178 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
TO15178 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.67■□□□□ 0.42
TO15178 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.67■□□□□ 0.42
TO15178 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.67■□□□□ 0.42
TO15178 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.67■□□□□ 0.42
TO15178 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TO15178 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
TO15178 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TO15178 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TO15178 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
TO15178 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
TO15178 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TO15178 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TO15178 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
TO15178 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
TO15178 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TO15178 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TO15178 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
TO15178 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TO15178 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.66■□□□□ 0.42
TO15178 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TO15178 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TO15178 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TO15178 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TO15178 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TO15178 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
TO15178 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
TO15178 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TO15178 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
TO15178 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
TO15178 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.66■□□□□ 0.42
TO15178 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC17.66■□□□□ 0.42
TO15178 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
TO15178 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
TO15178 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.66■□□□□ 0.42
TO15178 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.66■□□□□ 0.42
TO15178 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.66■□□□□ 0.42
TO15178 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
TO15178 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.66■□□□□ 0.42
TO15178 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms