Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC21.61■■□□□ 1.05
DDX39AO00148 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX39AO00148 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX39AO00148 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.61■■□□□ 1.05
DDX39AO00148 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.61■■□□□ 1.05
DDX39AO00148 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC21.61■■□□□ 1.05
DDX39AO00148 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DDX39AO00148 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
DDX39AO00148 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
DDX39AO00148 TMA16-209ENST00000513272 803 ntTSL 2 BASIC21.61■■□□□ 1.05
DDX39AO00148 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.61■■□□□ 1.05
DDX39AO00148 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC21.61■■□□□ 1.05
DDX39AO00148 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
DDX39AO00148 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX39AO00148 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX39AO00148 KRT8P11-201ENST00000409686 1436 ntBASIC21.61■■□□□ 1.05
DDX39AO00148 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
DDX39AO00148 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
DDX39AO00148 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
DDX39AO00148 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX39AO00148 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DDX39AO00148 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.6■■□□□ 1.05
DDX39AO00148 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX39AO00148 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC21.6■■□□□ 1.05
DDX39AO00148 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
DDX39AO00148 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX39AO00148 RCN1P1-201ENST00000400413 996 ntBASIC21.6■■□□□ 1.05
DDX39AO00148 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC21.6■■□□□ 1.05
DDX39AO00148 ECEL1P2-202ENST00000465689 757 ntBASIC21.6■■□□□ 1.05
DDX39AO00148 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.6■■□□□ 1.05
DDX39AO00148 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC21.6■■□□□ 1.05
DDX39AO00148 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
DDX39AO00148 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX39AO00148 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX39AO00148 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DDX39AO00148 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX39AO00148 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
DDX39AO00148 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.6■■□□□ 1.05
DDX39AO00148 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
DDX39AO00148 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
DDX39AO00148 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC21.6■■□□□ 1.05
DDX39AO00148 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC21.6■■□□□ 1.05
DDX39AO00148 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.6■■□□□ 1.05
DDX39AO00148 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX39AO00148 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX39AO00148 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
DDX39AO00148 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX39AO00148 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX39AO00148 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX39AO00148 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC21.59■■□□□ 1.05
DDX39AO00148 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX39AO00148 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
DDX39AO00148 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC21.59■■□□□ 1.05
DDX39AO00148 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX39AO00148 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX39AO00148 FAM210CP-201ENST00000445714 574 ntBASIC21.59■■□□□ 1.05
DDX39AO00148 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC21.59■■□□□ 1.05
DDX39AO00148 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.59■■□□□ 1.05
DDX39AO00148 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
DDX39AO00148 AC005363.2-201ENST00000618631 242 ntBASIC21.59■■□□□ 1.05
DDX39AO00148 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
DDX39AO00148 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.59■■□□□ 1.05
DDX39AO00148 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX39AO00148 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC21.58■■□□□ 1.05
DDX39AO00148 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC21.58■■□□□ 1.05
DDX39AO00148 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
DDX39AO00148 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC21.58■■□□□ 1.05
DDX39AO00148 KRT18P22-201ENST00000402024 1347 ntBASIC21.58■■□□□ 1.05
DDX39AO00148 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC21.58■■□□□ 1.05
DDX39AO00148 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX39AO00148 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX39AO00148 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX39AO00148 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX39AO00148 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
DDX39AO00148 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC21.58■■□□□ 1.05
DDX39AO00148 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC21.58■■□□□ 1.05
DDX39AO00148 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
DDX39AO00148 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
DDX39AO00148 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
DDX39AO00148 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
DDX39AO00148 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC21.58■■□□□ 1.04
DDX39AO00148 Z82202.1-201ENST00000623446 1880 ntBASIC21.58■■□□□ 1.04
DDX39AO00148 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.58■■□□□ 1.04
DDX39AO00148 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
DDX39AO00148 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC21.58■■□□□ 1.04
DDX39AO00148 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX39AO00148 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DDX39AO00148 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX39AO00148 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC21.57■■□□□ 1.04
DDX39AO00148 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
DDX39AO00148 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX39AO00148 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC21.57■■□□□ 1.04
DDX39AO00148 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX39AO00148 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
DDX39AO00148 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX39AO00148 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
DDX39AO00148 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
DDX39AO00148 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC21.57■■□□□ 1.04
DDX39AO00148 KRT18P57-201ENST00000443599 1254 ntBASIC21.57■■□□□ 1.04
DDX39AO00148 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms