Protein–RNA interactions for Protein: A6NNA2

SRRM3, Serine/arginine repetitive matrix protein 3, humanhuman

Predicted RBP Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM3A6NNA2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.87■□□□□ 0.77
SRRM3A6NNA2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.87■□□□□ 0.77
SRRM3A6NNA2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
SRRM3A6NNA2 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
SRRM3A6NNA2 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
SRRM3A6NNA2 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC19.87■□□□□ 0.77
SRRM3A6NNA2 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
SRRM3A6NNA2 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
SRRM3A6NNA2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.87■□□□□ 0.77
SRRM3A6NNA2 AL133373.2-201ENST00000623187 2828 ntBASIC19.87■□□□□ 0.77
SRRM3A6NNA2 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
SRRM3A6NNA2 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC19.86■□□□□ 0.77
SRRM3A6NNA2 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SRRM3A6NNA2 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.86■□□□□ 0.77
SRRM3A6NNA2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRRM3A6NNA2 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.86■□□□□ 0.77
SRRM3A6NNA2 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRRM3A6NNA2 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
SRRM3A6NNA2 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.86■□□□□ 0.77
SRRM3A6NNA2 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRRM3A6NNA2 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SRRM3A6NNA2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.86■□□□□ 0.77
SRRM3A6NNA2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC19.86■□□□□ 0.77
SRRM3A6NNA2 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC19.86■□□□□ 0.77
SRRM3A6NNA2 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.86■□□□□ 0.77
SRRM3A6NNA2 AP001412.1-201ENST00000608405 714 ntBASIC19.86■□□□□ 0.77
SRRM3A6NNA2 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SRRM3A6NNA2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.86■□□□□ 0.77
SRRM3A6NNA2 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRRM3A6NNA2 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
SRRM3A6NNA2 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
SRRM3A6NNA2 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRRM3A6NNA2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.85■□□□□ 0.77
SRRM3A6NNA2 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRRM3A6NNA2 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.85■□□□□ 0.77
SRRM3A6NNA2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SRRM3A6NNA2 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.85■□□□□ 0.77
SRRM3A6NNA2 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC19.85■□□□□ 0.77
SRRM3A6NNA2 EEF1DP3-203ENST00000566025 782 ntBASIC19.85■□□□□ 0.77
SRRM3A6NNA2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.85■□□□□ 0.77
SRRM3A6NNA2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRRM3A6NNA2 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.85■□□□□ 0.77
SRRM3A6NNA2 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SRRM3A6NNA2 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.85■□□□□ 0.77
SRRM3A6NNA2 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
SRRM3A6NNA2 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.85■□□□□ 0.77
SRRM3A6NNA2 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
SRRM3A6NNA2 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 AC061975.6-201ENST00000579045 1553 ntBASIC19.84■□□□□ 0.77
SRRM3A6NNA2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
SRRM3A6NNA2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
SRRM3A6NNA2 AC006333.2-201ENST00000607957 2099 ntBASIC19.83■□□□□ 0.77
SRRM3A6NNA2 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
SRRM3A6NNA2 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SRRM3A6NNA2 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SRRM3A6NNA2 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.83■□□□□ 0.77
SRRM3A6NNA2 KRT17P1-201ENST00000399211 1546 ntBASIC19.83■□□□□ 0.77
SRRM3A6NNA2 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
SRRM3A6NNA2 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SRRM3A6NNA2 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
SRRM3A6NNA2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
SRRM3A6NNA2 AL355075.4-201ENST00000554988 638 ntBASIC19.83■□□□□ 0.77
SRRM3A6NNA2 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.83■□□□□ 0.77
SRRM3A6NNA2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
SRRM3A6NNA2 SNX21-213ENST00000614929 587 ntTSL 5 BASIC19.83■□□□□ 0.77
SRRM3A6NNA2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SRRM3A6NNA2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SRRM3A6NNA2 AC068880.1-201ENST00000507289 2297 ntBASIC19.83■□□□□ 0.76
SRRM3A6NNA2 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.83■□□□□ 0.76
SRRM3A6NNA2 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.76
SRRM3A6NNA2 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
SRRM3A6NNA2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
SRRM3A6NNA2 USP49-202ENST00000373010 2446 ntTSL 5 BASIC19.83■□□□□ 0.76
SRRM3A6NNA2 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms