Protein–RNA interactions for Protein: A6NM66

LINC01548, Uncharacterized protein encoded by LINC01548, humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01548A6NM66 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01548A6NM66 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01548A6NM66 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC01548A6NM66 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01548A6NM66 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC01548A6NM66 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC01548A6NM66 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC15.16■□□□□ 0.02
LINC01548A6NM66 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
LINC01548A6NM66 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.16■□□□□ 0.02
LINC01548A6NM66 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01548A6NM66 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01548A6NM66 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
LINC01548A6NM66 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC15.16■□□□□ 0.02
LINC01548A6NM66 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LINC01548A6NM66 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC15.15■□□□□ 0.02
LINC01548A6NM66 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01548A6NM66 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01548A6NM66 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC01548A6NM66 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01548A6NM66 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01548A6NM66 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC01548A6NM66 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01548A6NM66 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC01548A6NM66 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01548A6NM66 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01548A6NM66 FAM207BP-201ENST00000447172 505 ntBASIC15.15■□□□□ 0.02
LINC01548A6NM66 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC01548A6NM66 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01548A6NM66 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC15.15■□□□□ 0.02
LINC01548A6NM66 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01548A6NM66 AP000692.2-201ENST00000608391 879 ntBASIC15.15■□□□□ 0.02
LINC01548A6NM66 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
LINC01548A6NM66 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01548A6NM66 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01548A6NM66 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.15■□□□□ 0.02
LINC01548A6NM66 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01548A6NM66 AL032819.2-201ENST00000624543 2162 ntBASIC15.15■□□□□ 0.02
LINC01548A6NM66 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
LINC01548A6NM66 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
LINC01548A6NM66 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC01548A6NM66 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC15.15■□□□□ 0.02
LINC01548A6NM66 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01548A6NM66 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01548A6NM66 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01548A6NM66 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01548A6NM66 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LINC01548A6NM66 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01548A6NM66 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01548A6NM66 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01548A6NM66 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01548A6NM66 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01548A6NM66 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01548A6NM66 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01548A6NM66 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01548A6NM66 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01548A6NM66 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
LINC01548A6NM66 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
LINC01548A6NM66 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC01548A6NM66 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01548A6NM66 CRYGFP-201ENST00000418459 633 ntBASIC15.14■□□□□ 0.01
LINC01548A6NM66 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.14■□□□□ 0.01
LINC01548A6NM66 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.14■□□□□ 0.01
LINC01548A6NM66 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.14■□□□□ 0.01
LINC01548A6NM66 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LINC01548A6NM66 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01548A6NM66 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC15.14■□□□□ 0.01
LINC01548A6NM66 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC15.14■□□□□ 0.01
LINC01548A6NM66 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC15.14■□□□□ 0.01
LINC01548A6NM66 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
LINC01548A6NM66 CYP2D8P-201ENST00000433633 1490 ntBASIC15.14■□□□□ 0.01
LINC01548A6NM66 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
LINC01548A6NM66 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
LINC01548A6NM66 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
LINC01548A6NM66 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01548A6NM66 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01548A6NM66 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01548A6NM66 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01548A6NM66 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01548A6NM66 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01548A6NM66 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01548A6NM66 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01548A6NM66 MMP23A-201ENST00000234610 1017 ntBASIC15.13■□□□□ 0.01
LINC01548A6NM66 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01548A6NM66 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01548A6NM66 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01548A6NM66 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
LINC01548A6NM66 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01548A6NM66 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC01548A6NM66 AC087499.1-201ENST00000418141 1075 ntBASIC15.13■□□□□ 0.01
LINC01548A6NM66 GLRB-205ENST00000512619 728 ntTSL 3 BASIC15.13■□□□□ 0.01
LINC01548A6NM66 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC01548A6NM66 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC15.13■□□□□ 0.01
LINC01548A6NM66 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC15.13■□□□□ 0.01
LINC01548A6NM66 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
LINC01548A6NM66 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC15.13■□□□□ 0.01
LINC01548A6NM66 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
LINC01548A6NM66 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.13■□□□□ 0.01
LINC01548A6NM66 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC15.13■□□□□ 0.01
LINC01548A6NM66 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC15.13■□□□□ 0.01
LINC01548A6NM66 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms