Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 RPL18-214ENST00000552588 559 ntTSL 3 BASIC22.37■■□□□ 1.17
TMEM88BA6NKF7 AC009065.1-201ENST00000564055 1225 ntBASIC22.37■■□□□ 1.17
TMEM88BA6NKF7 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC22.37■■□□□ 1.17
TMEM88BA6NKF7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
TMEM88BA6NKF7 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TMEM88BA6NKF7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
TMEM88BA6NKF7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TMEM88BA6NKF7 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
TMEM88BA6NKF7 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC22.37■■□□□ 1.17
TMEM88BA6NKF7 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC22.37■■□□□ 1.17
TMEM88BA6NKF7 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TMEM88BA6NKF7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TMEM88BA6NKF7 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC22.37■■□□□ 1.17
TMEM88BA6NKF7 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TMEM88BA6NKF7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TMEM88BA6NKF7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TMEM88BA6NKF7 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TMEM88BA6NKF7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
TMEM88BA6NKF7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TMEM88BA6NKF7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC22.36■■□□□ 1.17
TMEM88BA6NKF7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC22.36■■□□□ 1.17
TMEM88BA6NKF7 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
TMEM88BA6NKF7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TMEM88BA6NKF7 ZNF259P1-201ENST00000407656 1365 ntBASIC22.36■■□□□ 1.17
TMEM88BA6NKF7 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC22.36■■□□□ 1.17
TMEM88BA6NKF7 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC22.36■■□□□ 1.17
TMEM88BA6NKF7 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
TMEM88BA6NKF7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.35■■□□□ 1.17
TMEM88BA6NKF7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC22.35■■□□□ 1.17
TMEM88BA6NKF7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
TMEM88BA6NKF7 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TMEM88BA6NKF7 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC22.35■■□□□ 1.17
TMEM88BA6NKF7 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TMEM88BA6NKF7 AC148477.8-201ENST00000624298 468 ntBASIC22.35■■□□□ 1.17
TMEM88BA6NKF7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TMEM88BA6NKF7 GUSBP5-202ENST00000510805 1989 ntBASIC22.35■■□□□ 1.17
TMEM88BA6NKF7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TMEM88BA6NKF7 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TMEM88BA6NKF7 FP700111.2-201ENST00000619190 1892 ntBASIC22.34■■□□□ 1.17
TMEM88BA6NKF7 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TMEM88BA6NKF7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
TMEM88BA6NKF7 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC22.34■■□□□ 1.17
TMEM88BA6NKF7 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TMEM88BA6NKF7 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TMEM88BA6NKF7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC22.34■■□□□ 1.17
TMEM88BA6NKF7 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TMEM88BA6NKF7 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TMEM88BA6NKF7 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC22.34■■□□□ 1.17
TMEM88BA6NKF7 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TMEM88BA6NKF7 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
TMEM88BA6NKF7 MIR3917-201ENST00000580971 93 ntBASIC22.34■■□□□ 1.17
TMEM88BA6NKF7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC22.34■■□□□ 1.17
TMEM88BA6NKF7 LITAF-220ENST00000620789 692 ntTSL 5 BASIC22.34■■□□□ 1.17
TMEM88BA6NKF7 CCNC-219ENST00000627680 896 ntTSL 5 BASIC22.34■■□□□ 1.17
TMEM88BA6NKF7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
TMEM88BA6NKF7 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TMEM88BA6NKF7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC22.34■■□□□ 1.17
TMEM88BA6NKF7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TMEM88BA6NKF7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
TMEM88BA6NKF7 AC036111.1-201ENST00000533973 1582 ntBASIC22.33■■□□□ 1.17
TMEM88BA6NKF7 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
TMEM88BA6NKF7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TMEM88BA6NKF7 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TMEM88BA6NKF7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC22.33■■□□□ 1.17
TMEM88BA6NKF7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TMEM88BA6NKF7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TMEM88BA6NKF7 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TMEM88BA6NKF7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
TMEM88BA6NKF7 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TMEM88BA6NKF7 AC098831.1-202ENST00000438821 336 ntBASIC22.33■■□□□ 1.17
TMEM88BA6NKF7 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC22.33■■□□□ 1.17
TMEM88BA6NKF7 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TMEM88BA6NKF7 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC22.33■■□□□ 1.17
TMEM88BA6NKF7 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC22.33■■□□□ 1.17
TMEM88BA6NKF7 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TMEM88BA6NKF7 AC005332.3-201ENST00000589904 676 ntBASIC22.33■■□□□ 1.17
TMEM88BA6NKF7 AP001160.2-201ENST00000596071 487 ntBASIC22.33■■□□□ 1.17
TMEM88BA6NKF7 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
TMEM88BA6NKF7 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
TMEM88BA6NKF7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
TMEM88BA6NKF7 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TMEM88BA6NKF7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
TMEM88BA6NKF7 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
TMEM88BA6NKF7 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
TMEM88BA6NKF7 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
TMEM88BA6NKF7 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TMEM88BA6NKF7 NUS1P2-201ENST00000417358 873 ntBASIC22.32■■□□□ 1.16
TMEM88BA6NKF7 CFL1-212ENST00000531413 636 ntTSL 3 BASIC22.32■■□□□ 1.16
TMEM88BA6NKF7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC22.32■■□□□ 1.16
TMEM88BA6NKF7 IGHV3OR16-7-201ENST00000604106 360 ntBASIC22.32■■□□□ 1.16
TMEM88BA6NKF7 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC22.32■■□□□ 1.16
TMEM88BA6NKF7 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TMEM88BA6NKF7 GPAT2P1-201ENST00000444924 1672 ntBASIC22.32■■□□□ 1.16
TMEM88BA6NKF7 Z98882.1-201ENST00000622160 2253 ntBASIC22.32■■□□□ 1.16
TMEM88BA6NKF7 AL024507.2-201ENST00000606070 2574 ntBASIC22.32■■□□□ 1.16
TMEM88BA6NKF7 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
TMEM88BA6NKF7 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
TMEM88BA6NKF7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
TMEM88BA6NKF7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC22.31■■□□□ 1.16
TMEM88BA6NKF7 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC22.31■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms