Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 AC233723.2-201ENST00000623798 2106 ntBASIC18.35■□□□□ 0.53
CNOT1A5YKK6 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT1A5YKK6 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT1A5YKK6 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT1A5YKK6 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT1A5YKK6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CNOT1A5YKK6 AL117328.2-201ENST00000624617 1940 ntBASIC18.35■□□□□ 0.53
CNOT1A5YKK6 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT1A5YKK6 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT1A5YKK6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.35■□□□□ 0.53
CNOT1A5YKK6 PMS2P2-201ENST00000425039 1128 ntBASIC18.35■□□□□ 0.53
CNOT1A5YKK6 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT1A5YKK6 PMS2P7-201ENST00000506558 1336 ntBASIC18.35■□□□□ 0.53
CNOT1A5YKK6 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT1A5YKK6 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CNOT1A5YKK6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT1A5YKK6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT1A5YKK6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.35■□□□□ 0.53
CNOT1A5YKK6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT1A5YKK6 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CNOT1A5YKK6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT1A5YKK6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT1A5YKK6 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
CNOT1A5YKK6 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.34■□□□□ 0.53
CNOT1A5YKK6 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.34■□□□□ 0.53
CNOT1A5YKK6 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT1A5YKK6 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT1A5YKK6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CNOT1A5YKK6 AC027601.4-201ENST00000611259 610 ntBASIC18.34■□□□□ 0.53
CNOT1A5YKK6 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CNOT1A5YKK6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
CNOT1A5YKK6 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT1A5YKK6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT1A5YKK6 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.34■□□□□ 0.53
CNOT1A5YKK6 GUSBP5-202ENST00000510805 1989 ntBASIC18.34■□□□□ 0.53
CNOT1A5YKK6 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT1A5YKK6 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT1A5YKK6 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT1A5YKK6 AP001005.1-201ENST00000571755 1248 ntBASIC18.34■□□□□ 0.53
CNOT1A5YKK6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT1A5YKK6 FEM1AP1-201ENST00000431297 1995 ntBASIC18.34■□□□□ 0.53
CNOT1A5YKK6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CNOT1A5YKK6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.33■□□□□ 0.53
CNOT1A5YKK6 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CNOT1A5YKK6 FAM197Y8-203ENST00000450145 560 ntBASIC18.33■□□□□ 0.53
CNOT1A5YKK6 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC18.33■□□□□ 0.53
CNOT1A5YKK6 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC18.33■□□□□ 0.53
CNOT1A5YKK6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNOT1A5YKK6 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNOT1A5YKK6 FBXW4P1-201ENST00000426721 2239 ntBASIC18.33■□□□□ 0.53
CNOT1A5YKK6 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CNOT1A5YKK6 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.33■□□□□ 0.52
CNOT1A5YKK6 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CNOT1A5YKK6 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT1A5YKK6 SAPCD2P3-201ENST00000455031 850 ntBASIC18.33■□□□□ 0.52
CNOT1A5YKK6 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.33■□□□□ 0.52
CNOT1A5YKK6 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC18.33■□□□□ 0.52
CNOT1A5YKK6 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.33■□□□□ 0.52
CNOT1A5YKK6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.33■□□□□ 0.52
CNOT1A5YKK6 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC18.33■□□□□ 0.52
CNOT1A5YKK6 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CNOT1A5YKK6 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC18.33■□□□□ 0.52
CNOT1A5YKK6 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CNOT1A5YKK6 AC055717.3-201ENST00000622967 595 ntBASIC18.33■□□□□ 0.52
CNOT1A5YKK6 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.33■□□□□ 0.52
CNOT1A5YKK6 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT1A5YKK6 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CNOT1A5YKK6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CNOT1A5YKK6 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CNOT1A5YKK6 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
CNOT1A5YKK6 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT1A5YKK6 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT1A5YKK6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT1A5YKK6 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.32■□□□□ 0.52
CNOT1A5YKK6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT1A5YKK6 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.32■□□□□ 0.52
CNOT1A5YKK6 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.32■□□□□ 0.52
CNOT1A5YKK6 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.32■□□□□ 0.52
CNOT1A5YKK6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.32■□□□□ 0.52
CNOT1A5YKK6 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC18.32■□□□□ 0.52
CNOT1A5YKK6 AL157888.1-201ENST00000631930 593 ntBASIC18.32■□□□□ 0.52
CNOT1A5YKK6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT1A5YKK6 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CNOT1A5YKK6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT1A5YKK6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.32■□□□□ 0.52
CNOT1A5YKK6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT1A5YKK6 AL391807.1-203ENST00000604392 2365 ntBASIC18.32■□□□□ 0.52
CNOT1A5YKK6 AKR1C7P-201ENST00000305623 895 ntBASIC18.32■□□□□ 0.52
CNOT1A5YKK6 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT1A5YKK6 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT1A5YKK6 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CNOT1A5YKK6 AP001160.2-201ENST00000596071 487 ntBASIC18.32■□□□□ 0.52
CNOT1A5YKK6 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CNOT1A5YKK6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms