Protein–RNA interactions for Protein: A0A140T963

RNF103-CHMP3, RNF103-CHMP3 readthrough (Fragment), humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF103-CHMP3A0A140T963 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 MIPEPP3-201ENST00000412105 444 ntBASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
RNF103-CHMP3A0A140T963 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 AC018470.1-201ENST00000624790 3129 ntBASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 DUSP5P2-201ENST00000426873 1033 ntBASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 NME6-213ENST00000451657 871 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 AC116351.2-201ENST00000606540 1585 ntBASIC18.47■□□□□ 0.55
RNF103-CHMP3A0A140T963 PKD1P1-201ENST00000458669 6805 ntBASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 AC104581.1-202ENST00000635932 2618 ntBASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 AL390719.1-204ENST00000412397 1219 ntBASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 AC083906.2-201ENST00000511578 360 ntBASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
RNF103-CHMP3A0A140T963 AC079598.2-202ENST00000546624 1451 ntBASIC18.46■□□□□ 0.54
RNF103-CHMP3A0A140T963 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 AC092118.2-201ENST00000613495 667 ntBASIC18.45■□□□□ 0.54
RNF103-CHMP3A0A140T963 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms