Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 KRT8P9-201ENST00000558927 1449 ntBASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
IGHV4-28A0A0C4DH34 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 DERL1-203ENST00000419562 918 ntTSL 2 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 AC091390.4-202ENST00000476426 537 ntBASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 ME2-218ENST00000640965 2476 ntTSL 5 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
IGHV4-28A0A0C4DH34 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 AC008040.2-201ENST00000461049 708 ntBASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 NAPSB-206ENST00000562112 1266 ntBASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 AP005242.2-201ENST00000580065 1175 ntBASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 CYGB-204ENST00000589342 815 ntTSL 3 BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 AP000692.2-201ENST00000608391 879 ntBASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.87□□□□□ -0.19
IGHV4-28A0A0C4DH34 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC13.86□□□□□ -0.19
IGHV4-28A0A0C4DH34 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV4-28A0A0C4DH34 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC13.86□□□□□ -0.19
IGHV4-28A0A0C4DH34 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV4-28A0A0C4DH34 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.19
IGHV4-28A0A0C4DH34 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV4-28A0A0C4DH34 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC13.86□□□□□ -0.19
IGHV4-28A0A0C4DH34 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV4-28A0A0C4DH34 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV4-28A0A0C4DH34 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV4-28A0A0C4DH34 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV4-28A0A0C4DH34 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV4-28A0A0C4DH34 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
IGHV4-28A0A0C4DH34 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
IGHV4-28A0A0C4DH34 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.86□□□□□ -0.19
IGHV4-28A0A0C4DH34 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC13.86□□□□□ -0.19
IGHV4-28A0A0C4DH34 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms