Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
LOC102724428A0A0B4J2F2 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
LOC102724428A0A0B4J2F2 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC24.46■■□□□ 1.51
LOC102724428A0A0B4J2F2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
LOC102724428A0A0B4J2F2 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
LOC102724428A0A0B4J2F2 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC24.46■■□□□ 1.51
LOC102724428A0A0B4J2F2 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
LOC102724428A0A0B4J2F2 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
LOC102724428A0A0B4J2F2 KRT8P10-201ENST00000450021 1447 ntBASIC24.45■■□□□ 1.51
LOC102724428A0A0B4J2F2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
LOC102724428A0A0B4J2F2 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC24.45■■□□□ 1.5
LOC102724428A0A0B4J2F2 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.45■■□□□ 1.5
LOC102724428A0A0B4J2F2 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
LOC102724428A0A0B4J2F2 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
LOC102724428A0A0B4J2F2 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
LOC102724428A0A0B4J2F2 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
LOC102724428A0A0B4J2F2 TBCB-205ENST00000585746 875 ntTSL 3 BASIC24.45■■□□□ 1.5
LOC102724428A0A0B4J2F2 AP002414.4-201ENST00000589764 1148 ntBASIC24.45■■□□□ 1.5
LOC102724428A0A0B4J2F2 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC24.45■■□□□ 1.5
LOC102724428A0A0B4J2F2 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC24.45■■□□□ 1.5
LOC102724428A0A0B4J2F2 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC24.45■■□□□ 1.5
LOC102724428A0A0B4J2F2 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
LOC102724428A0A0B4J2F2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
LOC102724428A0A0B4J2F2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC24.45■■□□□ 1.5
LOC102724428A0A0B4J2F2 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 FAAHP1-202ENST00000446499 1238 ntBASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 AC036111.1-201ENST00000533973 1582 ntBASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
LOC102724428A0A0B4J2F2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
LOC102724428A0A0B4J2F2 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC24.43■■□□□ 1.5
LOC102724428A0A0B4J2F2 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC24.43■■□□□ 1.5
LOC102724428A0A0B4J2F2 AL162741.1-201ENST00000565563 1558 ntBASIC24.43■■□□□ 1.5
LOC102724428A0A0B4J2F2 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC24.43■■□□□ 1.5
LOC102724428A0A0B4J2F2 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC24.43■■□□□ 1.5
LOC102724428A0A0B4J2F2 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC24.43■■□□□ 1.5
LOC102724428A0A0B4J2F2 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC24.43■■□□□ 1.5
LOC102724428A0A0B4J2F2 AC079602.3-201ENST00000623931 403 ntBASIC24.43■■□□□ 1.5
LOC102724428A0A0B4J2F2 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
LOC102724428A0A0B4J2F2 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 AL391422.3-201ENST00000603791 2761 ntBASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 AL023284.2-201ENST00000405850 579 ntBASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 NUS1P1-201ENST00000446295 882 ntBASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 KRT8P26-201ENST00000534154 1276 ntBASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
LOC102724428A0A0B4J2F2 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LOC102724428A0A0B4J2F2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC24.41■■□□□ 1.5
LOC102724428A0A0B4J2F2 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC24.41■■□□□ 1.5
LOC102724428A0A0B4J2F2 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LOC102724428A0A0B4J2F2 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LOC102724428A0A0B4J2F2 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LOC102724428A0A0B4J2F2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LOC102724428A0A0B4J2F2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LOC102724428A0A0B4J2F2 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC24.41■■□□□ 1.5
LOC102724428A0A0B4J2F2 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC24.41■■□□□ 1.5
LOC102724428A0A0B4J2F2 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
LOC102724428A0A0B4J2F2 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC24.41■■□□□ 1.5
LOC102724428A0A0B4J2F2 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms