Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 CROCCP1-201ENST00000426910 5675 ntBASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 AL032819.2-201ENST00000624543 2162 ntBASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 AC069152.1-201ENST00000438030 544 ntBASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 AC142086.2-201ENST00000569753 217 ntBASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 WIPI2-201ENST00000288828 4476 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 DUSP5P2-201ENST00000426873 1033 ntBASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 MOK-225ENST00000522867 1883 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 LTB4R2-202ENST00000528054 3092 ntBASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 PELI2-201ENST00000267460 5909 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 CD37-204ENST00000535669 1674 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 STK25-205ENST00000405883 1904 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 LINC01465-201ENST00000408887 1940 ntBASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 TP73-202ENST00000354437 2140 ntTSL 5 BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 AC091874.3-201ENST00000512672 1195 ntBASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC13.59□□□□□ -0.23
TRAV8-3A0A0A6YYJ7 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms