Protein–RNA interactions for Protein: Q9UPM6

LHX6, LIM/homeobox protein Lhx6, humanhuman

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX6Q9UPM6 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
LHX6Q9UPM6 ZNF3-203ENST00000303915 3473 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
LHX6Q9UPM6 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 CENPJ-201ENST00000381884 4347 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 AC000374.1-201ENST00000434698 1745 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 ASAH1-232ENST00000636691 2472 ntTSL 5 BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 AC008758.3-201ENST00000507003 1829 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 PROS2P-201ENST00000474651 1951 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 MED23-201ENST00000354577 4581 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 USP46-202ENST00000451218 4622 ntTSL 5 BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RNU6-222P-201ENST00000362438 107 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RNU6-37P-201ENST00000362692 107 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RNU6-11P-201ENST00000364234 107 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RNU6-7-201ENST00000364784 107 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RNU6-8-201ENST00000365467 107 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 CDC123-202ENST00000378900 933 ntTSL 5 BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RNU6-25P-201ENST00000383873 107 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RNU6-1-201ENST00000383898 107 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RNU6-76P-201ENST00000384060 104 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RNU6-36P-201ENST00000384172 107 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RNU6-4P-201ENST00000384205 107 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RNU6-5P-201ENST00000384238 107 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RNU6-3P-201ENST00000384314 107 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RNU6-16P-201ENST00000384385 107 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RNU6-15P-201ENST00000384534 107 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RNA5SP284-201ENST00000384547 118 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RNU6-2-201ENST00000384627 107 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RNU6-29P-201ENST00000384637 107 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RNU6-9-201ENST00000384776 107 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 AL035422.1-201ENST00000414193 397 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 AL354707.3-201ENST00000427308 331 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 MTND6P12-201ENST00000428247 522 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 AC018467.1-202ENST00000432612 533 ntTSL 3 BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 AL136084.2-202ENST00000433997 353 ntTSL 2 BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RPS15AP7-201ENST00000439294 405 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 VPS25P1-201ENST00000455691 508 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RN7SL515P-201ENST00000463999 297 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 AC092865.4-201ENST00000477936 615 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RN7SL797P-201ENST00000486314 297 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 AC006499.3-201ENST00000506077 748 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 HMGB3P16-201ENST00000508037 287 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 FCF1P8-201ENST00000510322 597 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 SNORA40.9-201ENST00000515895 93 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 SNORD46.2-201ENST00000516021 102 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 MIR4489-201ENST00000578869 62 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RN7SL404P-201ENST00000582421 281 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 AC008814.1-201ENST00000603797 406 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 AL035410.2-201ENST00000604963 864 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 IGKV2OR2-1-201ENST00000605129 304 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 RNU6-6P-201ENST00000606623 107 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 snoU18.1-201ENST00000629629 71 ntBASIC6.39□□□□□ -1.39
LHX6Q9UPM6 LINC01360-203ENST00000440762 3871 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 FYB1-210ENST00000515010 2578 ntAPPRIS P3 TSL 1 (best) BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 ELMO2-203ENST00000372176 3678 ntTSL 5 BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 WDR89-202ENST00000394942 2993 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 EBF1-211ENST00000622875 4430 ntTSL 5 BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC6.39□□□□□ -1.39
LHX6Q9UPM6 AC139769.1-204ENST00000472297 1931 ntBASIC6.38□□□□□ -1.39
LHX6Q9UPM6 ALB-214ENST00000509063 1911 ntTSL 5 BASIC6.38□□□□□ -1.39
LHX6Q9UPM6 EZH1-202ENST00000428826 4623 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LHX6Q9UPM6 REST-201ENST00000309042 7300 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LHX6Q9UPM6 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC6.38□□□□□ -1.39
LHX6Q9UPM6 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LHX6Q9UPM6 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.38□□□□□ -1.39
LHX6Q9UPM6 KLF7-201ENST00000309446 8362 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LHX6Q9UPM6 SOS2-202ENST00000543680 3960 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LHX6Q9UPM6 CYP2C18-201ENST00000285979 2418 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LHX6Q9UPM6 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
LHX6Q9UPM6 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
LHX6Q9UPM6 OR52B5P-204ENST00000641744 3467 ntBASIC6.38□□□□□ -1.39
LHX6Q9UPM6 SNORD12B-201ENST00000410433 91 ntBASIC6.38□□□□□ -1.39
LHX6Q9UPM6 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC6.38□□□□□ -1.39
LHX6Q9UPM6 TBCAP2-201ENST00000416175 326 ntBASIC6.38□□□□□ -1.39
LHX6Q9UPM6 AC234781.4-201ENST00000419384 244 ntBASIC6.38□□□□□ -1.39
LHX6Q9UPM6 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.38□□□□□ -1.39
LHX6Q9UPM6 AL031736.2-201ENST00000426573 787 ntBASIC6.38□□□□□ -1.39
LHX6Q9UPM6 KRTAP3-4P-201ENST00000430780 280 ntBASIC6.38□□□□□ -1.39
LHX6Q9UPM6 HMGB1P27-201ENST00000431429 603 ntBASIC6.38□□□□□ -1.39
LHX6Q9UPM6 HLA-DPA3-207ENST00000454398 229 ntBASIC6.38□□□□□ -1.39
LHX6Q9UPM6 snoU13.30-201ENST00000458951 104 ntBASIC6.38□□□□□ -1.39
LHX6Q9UPM6 RPS29P27-201ENST00000463711 170 ntBASIC6.38□□□□□ -1.39
LHX6Q9UPM6 AC026336.1-201ENST00000466577 351 ntBASIC6.38□□□□□ -1.39
LHX6Q9UPM6 FAM107B-217ENST00000478076 790 ntAPPRIS P1 TSL 4 BASIC6.38□□□□□ -1.39
LHX6Q9UPM6 RNU5E-3P-201ENST00000515913 68 ntBASIC6.38□□□□□ -1.39
LHX6Q9UPM6 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.38□□□□□ -1.39
LHX6Q9UPM6 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC6.38□□□□□ -1.39
LHX6Q9UPM6 AC090616.3-201ENST00000582184 217 ntBASIC6.38□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms