Protein–RNA interactions for Protein: Q9NXR1

NDE1, Nuclear distribution protein nudE homolog 1, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1Q9NXR1 UBE2NP1-201ENST00000545592 458 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 AC090888.1-201ENST00000561335 1141 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 MIR4999-201ENST00000585029 91 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 MIR3138-201ENST00000585238 82 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 AC015726.1-201ENST00000602353 681 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 AC006270.3-201ENST00000605967 1036 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 AP001521.1-201ENST00000609150 300 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 AC245297.3-203ENST00000612135 405 ntTSL 5 BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 AC006338.2-201ENST00000616864 791 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.43□□□□□ -1.86
NDE1Q9NXR1 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
NDE1Q9NXR1 ZNF483-201ENST00000309235 3655 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 NMD3P1-201ENST00000439704 1488 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AC007656.2-201ENST00000624902 4547 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 SNORD56.3-201ENST00000363507 71 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 SNORA4.1-201ENST00000364263 144 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 SNORA3.3-201ENST00000408712 125 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 SDCBPP2-201ENST00000424643 885 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 RPS27AP12-201ENST00000429552 465 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AC241584.1-201ENST00000438469 1241 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 MTCYBP3-201ENST00000445588 1137 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AL122001.1-201ENST00000457027 370 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AC092185.1-201ENST00000491371 97 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AC093281.2-201ENST00000510153 597 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AC005921.1-201ENST00000510589 286 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AC023141.12-201ENST00000512399 199 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AC104027.1-201ENST00000521887 300 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AC009643.1-201ENST00000532030 391 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 TRAV37-201ENST00000553906 342 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AL512347.1-201ENST00000566420 503 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 LLPHP1-201ENST00000603571 367 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 Z99497.2-201ENST00000603634 310 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 Z94722.1-201ENST00000604328 474 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AL592221.1-201ENST00000605266 382 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AC072039.2-201ENST00000608883 439 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AC083809.1-201ENST00000615051 472 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AC006065.5-201ENST00000623427 349 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 MIR3974-201ENST00000637126 96 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 AC007671.2-201ENST00000637344 619 ntBASIC3.42□□□□□ -1.86
NDE1Q9NXR1 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
NDE1Q9NXR1 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 AC117529.2-201ENST00000512159 2068 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 RNU6-931P-201ENST00000363850 107 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 RN7SKP227-201ENST00000364445 330 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 U3.11-201ENST00000364476 212 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 RPL23AP29-201ENST00000397284 453 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 AL583834.1-201ENST00000406943 343 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 AC004987.3-201ENST00000413879 771 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 HMGB3P23-201ENST00000414981 585 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 NUP35P2-201ENST00000416748 943 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 AL022400.1-201ENST00000423946 935 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 CCNB1IP1P2-201ENST00000432876 818 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 AL606662.1-201ENST00000445763 553 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 RSL24D1P3-201ENST00000449255 495 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 ZNF736P5Y-201ENST00000451173 805 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 HMGN3P1-201ENST00000453847 193 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.41□□□□□ -1.86
NDE1Q9NXR1 AC087879.1-201ENST00000474343 374 ntBASIC3.41□□□□□ -1.86
NDE1Q9NXR1 RPL21P103-201ENST00000479921 488 ntBASIC3.41□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms