Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AP002989.1-201ENST00000533459 562 ntTSL 4 BASIC5.82□□□□□ -1.48
ZFYVE28Q9HCC9 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC5.82□□□□□ -1.48
ZFYVE28Q9HCC9 AC128657.1-201ENST00000549459 145 ntBASIC5.82□□□□□ -1.48
ZFYVE28Q9HCC9 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.82□□□□□ -1.48
ZFYVE28Q9HCC9 COX6CP3-201ENST00000580869 223 ntBASIC5.82□□□□□ -1.48
ZFYVE28Q9HCC9 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.82□□□□□ -1.48
ZFYVE28Q9HCC9 AC123786.2-201ENST00000603459 275 ntBASIC5.82□□□□□ -1.48
ZFYVE28Q9HCC9 AC103710.3-201ENST00000608157 948 ntBASIC5.82□□□□□ -1.48
ZFYVE28Q9HCC9 RNA5SP439-201ENST00000617595 124 ntBASIC5.82□□□□□ -1.48
ZFYVE28Q9HCC9 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC5.82□□□□□ -1.48
ZFYVE28Q9HCC9 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
ZFYVE28Q9HCC9 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
ZFYVE28Q9HCC9 AC004972.1-201ENST00000623934 2209 ntBASIC5.82□□□□□ -1.48
ZFYVE28Q9HCC9 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
ZFYVE28Q9HCC9 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 AC100757.1-201ENST00000616872 1835 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 AC010266.2-201ENST00000564741 3255 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 AL122126.1-201ENST00000546905 1318 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 Y_RNA.22-201ENST00000362492 102 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 Y_RNA.202-201ENST00000364083 110 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 RNU4-20P-201ENST00000365601 151 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 RNU6-38P-201ENST00000384085 107 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 MIR19A-201ENST00000384878 82 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 AL606923.1-201ENST00000406616 190 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 AL161631.1-201ENST00000417933 486 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 AC093414.1-201ENST00000434712 514 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 TRAPPC2P3-201ENST00000443200 321 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 RAC1P7-201ENST00000445367 377 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 AURKAPS2-201ENST00000454983 333 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 RNU6-333P-201ENST00000459117 107 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 PPIAP21-201ENST00000464473 501 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 RPS4XP10-201ENST00000465034 731 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 RPL7L1P8-201ENST00000469911 741 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 RPL12P20-201ENST00000475538 479 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 MTCO1P29-201ENST00000496868 288 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 FAM206BP-201ENST00000510179 541 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 SNORA70.11-201ENST00000515987 138 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 SNORA70.13-201ENST00000516116 138 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 RNU6-559P-201ENST00000516151 98 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 RN7SKP21-201ENST00000516503 220 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 LSM3P2-201ENST00000551246 273 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 FRG2DP-202ENST00000566967 323 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 AC103710.2-201ENST00000609912 942 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 FILIP1-201ENST00000237172 4580 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 AC002525.1-201ENST00000624392 1622 ntBASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
ZFYVE28Q9HCC9 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 AC011978.2-201ENST00000569835 2054 ntBASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 GSTM2-206ENST00000442650 1478 ntTSL 5 BASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 ACTR3BP5-201ENST00000448440 1479 ntBASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 SNORA63C-201ENST00000364578 129 ntBASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 SNORD42.2-201ENST00000365570 69 ntBASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 RNU6-1013P-201ENST00000384180 107 ntBASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 RNU6-1297P-201ENST00000384415 104 ntBASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 AC004975.1-201ENST00000428733 208 ntBASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 MTATP6P16-201ENST00000434543 526 ntBASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 AC005154.2-201ENST00000438110 379 ntBASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 AC105402.2-201ENST00000438503 358 ntBASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.8□□□□□ -1.48
ZFYVE28Q9HCC9 AC020893.1-201ENST00000502452 580 ntBASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms