Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.78□□□□□ -1.96
RSPO3Q9BXY4 MAPK6PS3-201ENST00000403865 2162 ntBASIC2.78□□□□□ -1.96
RSPO3Q9BXY4 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC2.78□□□□□ -1.96
RSPO3Q9BXY4 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 RNA5-8SP4-201ENST00000365096 150 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 DYNLT3P1-201ENST00000378574 347 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 Y_RNA.510-201ENST00000384511 114 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 SNORD15B-201ENST00000384714 146 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 RNU6-298P-201ENST00000390888 96 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 SNORA48.5-201ENST00000391143 135 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 UBA52P6-201ENST00000399822 382 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 U3.42-201ENST00000408746 214 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 RN7SKP220-201ENST00000410611 288 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 RNU4-47P-201ENST00000410876 114 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 HMGB3P31-201ENST00000413333 595 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 AC008173.1-201ENST00000418901 264 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 AC241520.1-201ENST00000422654 1099 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 AL049637.1-201ENST00000424664 503 ntTSL 5 BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 FO393419.3-201ENST00000428741 282 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 AL031663.1-201ENST00000437445 219 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 RPL7P52-201ENST00000449200 742 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 AL096803.2-201ENST00000450032 677 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 SSXP4-201ENST00000451349 245 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 RPL37P3-201ENST00000456825 293 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 RPS15AP1-201ENST00000457423 391 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 RPL21P104-201ENST00000464143 478 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 AC104164.3-201ENST00000467363 1258 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 RN7SL283P-201ENST00000489055 303 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 AC110794.1-201ENST00000505816 425 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 TMEM248P1-201ENST00000510579 951 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 AC008885.1-201ENST00000514930 301 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 AC118942.1-201ENST00000529674 1035 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 AC027807.1-201ENST00000559921 996 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 SATB1-AS1-207ENST00000593741 955 ntTSL 5 BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 AL133393.1-201ENST00000603277 287 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 AC069304.3-201ENST00000603938 1084 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 AC099785.1-201ENST00000605697 437 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 AC004832.5-201ENST00000608677 401 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 AC055764.2-201ENST00000610089 670 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 AC083865.1-201ENST00000636634 831 ntBASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
RSPO3Q9BXY4 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 RNU6-452P-201ENST00000384406 107 ntBASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 MIR142-201ENST00000384835 87 ntBASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 SAR1AP2-201ENST00000392696 594 ntBASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 MIR1289-1-201ENST00000408836 144 ntBASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 RNU6-584P-201ENST00000410350 95 ntBASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 MTCO2P17-201ENST00000424336 677 ntBASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 MTND2P8-201ENST00000450555 1025 ntBASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 RPL21P8-201ENST00000465083 535 ntBASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 RPS3AP14-201ENST00000483907 780 ntBASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 RN7SL633P-201ENST00000488974 297 ntBASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 RPL23AP55-201ENST00000498163 452 ntBASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 LEF1-218ENST00000512172 598 ntTSL 2 BASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 OR5G4P-201ENST00000525251 760 ntBASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.76□□□□□ -1.97
RSPO3Q9BXY4 AL049838.1-201ENST00000563647 981 ntBASIC2.76□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms