Protein–RNA interactions for Protein: Q92922

SMARCC1, SWI/SNF complex subunit SMARCC1, humanhuman

Predicted RBP Predictions only

Length 1,105 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1Q92922 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMARCC1Q92922 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SMARCC1Q92922 AC107081.3-201ENST00000612715 2034 ntBASIC5.67□□□□□ -1.5
SMARCC1Q92922 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.67□□□□□ -1.5
SMARCC1Q92922 OR5M3-202ENST00000641993 1400 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SMARCC1Q92922 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SMARCC1Q92922 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC5.66□□□□□ -1.5
SMARCC1Q92922 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC5.66□□□□□ -1.5
SMARCC1Q92922 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMARCC1Q92922 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMARCC1Q92922 Y_RNA.11-201ENST00000362375 109 ntBASIC5.66□□□□□ -1.5
SMARCC1Q92922 TRAJ4-201ENST00000390533 63 ntAPPRIS P1 BASIC5.66□□□□□ -1.5
SMARCC1Q92922 DSTNP4-201ENST00000399472 474 ntBASIC5.66□□□□□ -1.5
SMARCC1Q92922 EIF5P1-201ENST00000400019 1231 ntBASIC5.66□□□□□ -1.5
SMARCC1Q92922 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC5.66□□□□□ -1.5
SMARCC1Q92922 RNU2-41P-201ENST00000410991 178 ntBASIC5.66□□□□□ -1.5
SMARCC1Q92922 RPL6P29-201ENST00000414863 865 ntBASIC5.66□□□□□ -1.5
SMARCC1Q92922 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC5.66□□□□□ -1.5
SMARCC1Q92922 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMARCC1Q92922 CKS1BP6-201ENST00000424932 240 ntBASIC5.66□□□□□ -1.5
SMARCC1Q92922 RPL31P35-201ENST00000431058 377 ntBASIC5.66□□□□□ -1.5
SMARCC1Q92922 RPEP2-201ENST00000432149 701 ntBASIC5.66□□□□□ -1.5
SMARCC1Q92922 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC5.66□□□□□ -1.5
SMARCC1Q92922 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC5.66□□□□□ -1.5
SMARCC1Q92922 AL356421.2-201ENST00000446733 197 ntTSL 3 BASIC5.66□□□□□ -1.5
SMARCC1Q92922 PTMAP3-201ENST00000447474 330 ntBASIC5.66□□□□□ -1.5
SMARCC1Q92922 AL162151.2-201ENST00000448875 158 ntBASIC5.66□□□□□ -1.5
SMARCC1Q92922 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC5.66□□□□□ -1.5
SMARCC1Q92922 C1DP4-201ENST00000455429 424 ntBASIC5.66□□□□□ -1.5
SMARCC1Q92922 MTCO3P2-201ENST00000457365 171 ntBASIC5.66□□□□□ -1.5
SMARCC1Q92922 RNU6-1218P-201ENST00000458990 108 ntBASIC5.66□□□□□ -1.5
SMARCC1Q92922 AC026410.2-201ENST00000460281 156 ntBASIC5.66□□□□□ -1.5
SMARCC1Q92922 RBM43P1-201ENST00000476891 1081 ntBASIC5.66□□□□□ -1.5
SMARCC1Q92922 RPL21P6-201ENST00000479171 504 ntBASIC5.66□□□□□ -1.5
SMARCC1Q92922 AC104383.1-201ENST00000530297 370 ntBASIC5.66□□□□□ -1.5
SMARCC1Q92922 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMARCC1Q92922 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC5.66□□□□□ -1.5
SMARCC1Q92922 AL512360.1-201ENST00000555346 234 ntBASIC5.66□□□□□ -1.5
SMARCC1Q92922 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC5.66□□□□□ -1.5
SMARCC1Q92922 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC5.66□□□□□ -1.5
SMARCC1Q92922 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC5.66□□□□□ -1.5
SMARCC1Q92922 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC5.66□□□□□ -1.5
SMARCC1Q92922 CKS1BP3-201ENST00000600888 237 ntBASIC5.66□□□□□ -1.5
SMARCC1Q92922 AL020991.1-201ENST00000612314 373 ntBASIC5.66□□□□□ -1.5
SMARCC1Q92922 MIR6075-201ENST00000620782 95 ntBASIC5.66□□□□□ -1.5
SMARCC1Q92922 LGALS13-204ENST00000621475 494 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
SMARCC1Q92922 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC5.66□□□□□ -1.5
SMARCC1Q92922 EFCAB5-213ENST00000638539 168 ntTSL 5 BASIC5.66□□□□□ -1.5
SMARCC1Q92922 COPG2-201ENST00000330992 3073 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMARCC1Q92922 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SMARCC1Q92922 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMARCC1Q92922 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SMARCC1Q92922 MAPK10-286ENST00000641208 8747 ntBASIC5.66□□□□□ -1.5
SMARCC1Q92922 AL133243.3-201ENST00000617415 3004 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC5.65□□□□□ -1.5
SMARCC1Q92922 ZNF33BP1-201ENST00000452497 1834 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SMARCC1Q92922 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.65□□□□□ -1.5
SMARCC1Q92922 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SMARCC1Q92922 Y_RNA.61-201ENST00000362835 102 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 RPS20P2-201ENST00000402520 389 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 RNA5SP44-201ENST00000410446 133 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 CYCSP19-201ENST00000411715 316 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
SMARCC1Q92922 OR51A5P-201ENST00000415429 942 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC5.65□□□□□ -1.5
SMARCC1Q92922 LINC01780-201ENST00000420059 442 ntTSL 2 BASIC5.65□□□□□ -1.5
SMARCC1Q92922 RPL7P2-201ENST00000427639 268 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 RPL36P19-201ENST00000430744 301 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC5.65□□□□□ -1.5
SMARCC1Q92922 RPL17P49-201ENST00000443728 411 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 ARPC3P5-201ENST00000448802 534 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC5.65□□□□□ -1.5
SMARCC1Q92922 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC5.65□□□□□ -1.5
SMARCC1Q92922 AC007182.2-201ENST00000489251 402 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.65□□□□□ -1.5
SMARCC1Q92922 AC091951.2-201ENST00000500762 203 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC5.65□□□□□ -1.5
SMARCC1Q92922 AL592156.1-201ENST00000508758 304 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 RNU6-358P-201ENST00000516564 75 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 RNA5SP143-201ENST00000516936 115 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 AC104986.1-201ENST00000517978 436 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.5
SMARCC1Q92922 AC053481.4-201ENST00000583164 216 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 RN7SL435P-201ENST00000584418 282 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 NRBF2P1-201ENST00000587407 859 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 AC008752.3-201ENST00000588113 712 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SMARCC1Q92922 AL365503.1-201ENST00000605247 905 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 RNU4-89P-201ENST00000607443 133 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.65□□□□□ -1.5
SMARCC1Q92922 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
SMARCC1Q92922 FAM27D1-201ENST00000612308 341 ntBASIC5.65□□□□□ -1.5
SMARCC1Q92922 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SMARCC1Q92922 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC5.65□□□□□ -1.51
SMARCC1Q92922 AC107068.1-201ENST00000563286 4218 ntBASIC5.65□□□□□ -1.51
SMARCC1Q92922 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC5.65□□□□□ -1.51
SMARCC1Q92922 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
SMARCC1Q92922 AC117529.2-201ENST00000512159 2068 ntBASIC5.65□□□□□ -1.51
SMARCC1Q92922 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms