Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC137499.1-201ENST00000427602 88 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 AL360081.1-201ENST00000428299 555 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 OR4K11P-201ENST00000431829 904 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 AC092324.1-201ENST00000468671 324 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 AL163973.1-201ENST00000484753 577 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 HMGB1P21-201ENST00000502313 581 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 AC011611.1-201ENST00000552179 197 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 AC087477.6-201ENST00000559595 843 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 OR4K8P-201ENST00000578842 1048 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 AC010928.3-201ENST00000587712 541 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 GLUD1P4-201ENST00000590914 418 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 MIR1302-1-201ENST00000637932 143 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 AL731566.1-201ENST00000620490 1937 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 OR4G1P-203ENST00000641984 1631 ntBASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 UBE4A-202ENST00000431736 6061 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
TRIM48Q8IWZ4 BMPR1APS1-201ENST00000403332 1598 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 AC009902.3-201ENST00000606235 2172 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 SDAD1P1-202ENST00000524156 2051 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 GPX8-203ENST00000503787 1411 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 DHX40P1-201ENST00000588725 1412 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 AL031119.1-201ENST00000404707 1879 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 ACSL5-204ENST00000393081 3380 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 RNU6-249P-201ENST00000363016 102 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 SNORA73.1-201ENST00000363107 205 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 SNORA63-201ENST00000363450 132 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 OR4F13P-201ENST00000428478 931 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 AC018644.1-201ENST00000429934 551 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 Z80107.2-201ENST00000445127 392 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 OR1H1P-201ENST00000448731 937 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 AL691482.1-201ENST00000453255 87 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 AC233279.1-201ENST00000455300 423 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 AL049714.1-201ENST00000466686 347 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 TMEM248P1-201ENST00000510579 951 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 AC114797.1-201ENST00000514003 728 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 RFPL4AP5-201ENST00000514977 504 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 AC100784.1-201ENST00000522790 310 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 SETP2-201ENST00000553886 926 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 MIR3667-201ENST00000581025 74 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 AC005498.1-201ENST00000592125 465 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 AL161729.3-201ENST00000603533 673 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 AC105429.2-201ENST00000610567 517 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 uc_338.12-201ENST00000616344 181 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 AC010329.2-201ENST00000595195 2737 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 AC020633.1-201ENST00000468439 2247 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 PATJ-213ENST00000613764 4172 ntTSL 5 BASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 SAMMSON-226ENST00000642089 1582 ntBASIC4.82□□□□□ -1.64
TRIM48Q8IWZ4 MATR3-228ENST00000620916 3134 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 MAPK10-349ENST00000641767 3661 ntBASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 NEAT1-202ENST00000501122 22743 ntBASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 AL122126.1-201ENST00000546905 1318 ntBASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 RNU1-130P-201ENST00000363930 160 ntBASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 CD3D-202ENST00000392884 476 ntTSL 2 BASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 AL358176.3-201ENST00000420757 454 ntBASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 AL049745.1-201ENST00000433953 286 ntBASIC4.81□□□□□ -1.64
TRIM48Q8IWZ4 RAC1P7-201ENST00000445367 377 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 98.4 ms