Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 AC095050.2-201ENST00000510748 1458 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHFQ7M4L6 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
SHFQ7M4L6 AL133412.1-201ENST00000380194 2992 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 RNU6-989P-201ENST00000362756 107 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 RN7SKP103-201ENST00000363848 320 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 Y_RNA.517-201ENST00000384551 106 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 AL133270.1-201ENST00000402635 279 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 Y_RNA.598-201ENST00000410480 95 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 OR8F1P-201ENST00000425243 930 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 FAM103A2P-201ENST00000444122 354 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 PDSS1P2-201ENST00000449397 678 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 Z82190.1-201ENST00000454534 490 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 SNRPFP4-201ENST00000456366 242 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
SHFQ7M4L6 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 AC010625.1-201ENST00000511296 403 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 AC108064.1-201ENST00000513791 460 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 RNU6-27P-201ENST00000516146 107 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 IGKV2-38-201ENST00000517443 247 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 IGKV2D-23-201ENST00000518179 286 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 AP002453.2-201ENST00000533503 320 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 AC009101.1-201ENST00000568135 242 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 MIR4528-201ENST00000577763 90 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 AC112191.3-201ENST00000604371 277 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 AC004492.1-201ENST00000607036 742 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 AC015540.1-201ENST00000615828 501 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 AC099669.2-201ENST00000616549 437 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 AC138932.5-201ENST00000617759 563 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 AP006248.2-201ENST00000623309 592 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 AP005264.7-201ENST00000625003 745 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 AC091925.2-201ENST00000625059 256 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 AL773545.4-201ENST00000637262 310 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 AL513478.4-201ENST00000641636 310 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 AC092447.10-201ENST00000620607 1652 ntBASIC3.74□□□□□ -1.81
SHFQ7M4L6 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.74□□□□□ -1.81
SHFQ7M4L6 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.73□□□□□ -1.81
SHFQ7M4L6 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.73□□□□□ -1.81
SHFQ7M4L6 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SHFQ7M4L6 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.73□□□□□ -1.81
SHFQ7M4L6 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.73□□□□□ -1.81
SHFQ7M4L6 AC079741.1-201ENST00000321498 212 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 MIR423-201ENST00000362201 94 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 RNU6-853P-201ENST00000364306 107 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 Y_RNA.234-201ENST00000364409 97 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SHFQ7M4L6 RNU6-761P-201ENST00000384148 107 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 Y_RNA.493-201ENST00000384422 102 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 MIR129-1-201ENST00000384972 72 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 MIR323B-201ENST00000385269 82 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 MT-TC-201ENST00000387405 66 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 SNORA40.3-201ENST00000390964 122 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 OR6C69P-201ENST00000394268 893 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
SHFQ7M4L6 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.73□□□□□ -1.81
SHFQ7M4L6 Z98941.1-201ENST00000407764 100 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 RNA5SP36-201ENST00000410197 133 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 RNU6-248P-201ENST00000410720 107 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC3.73□□□□□ -1.81
SHFQ7M4L6 RPEP3-201ENST00000425462 676 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 AL157831.1-201ENST00000426134 473 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC3.73□□□□□ -1.81
SHFQ7M4L6 AC016292.1-201ENST00000438344 235 ntTSL 3 BASIC3.73□□□□□ -1.81
SHFQ7M4L6 RPL23AP46-201ENST00000438548 490 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 RPL23AP33-201ENST00000442301 452 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 RPL29P29-201ENST00000448725 423 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 RPL7P52-201ENST00000449200 742 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 TPT1P13-201ENST00000449760 499 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC3.73□□□□□ -1.81
SHFQ7M4L6 SBDSP1-204ENST00000453858 737 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 RPS20P24-201ENST00000457473 361 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC3.73□□□□□ -1.81
SHFQ7M4L6 RPL32P9-201ENST00000487963 407 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 RN7SL810P-201ENST00000493031 276 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 RPL31P61-201ENST00000496160 376 ntBASIC3.73□□□□□ -1.81
SHFQ7M4L6 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.73□□□□□ -1.81
SHFQ7M4L6 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.73□□□□□ -1.81
SHFQ7M4L6 RNU6-720P-201ENST00000516363 108 ntBASIC3.73□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms