Protein–RNA interactions for Protein: Q5SRE5

NUP188, Nucleoporin NUP188 homolog, humanhuman

Predictions only

Length 1,749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188Q5SRE5 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.02□□□□□ -1.93
NUP188Q5SRE5 AC007677.1-201ENST00000445757 515 ntBASIC3.02□□□□□ -1.93
NUP188Q5SRE5 AC026436.1-201ENST00000510537 270 ntBASIC3.02□□□□□ -1.93
NUP188Q5SRE5 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC3.02□□□□□ -1.93
NUP188Q5SRE5 AC068339.2-201ENST00000534395 618 ntBASIC3.02□□□□□ -1.93
NUP188Q5SRE5 AC010198.2-201ENST00000550612 259 ntBASIC3.02□□□□□ -1.93
NUP188Q5SRE5 AL022099.1-201ENST00000604551 712 ntBASIC3.02□□□□□ -1.93
NUP188Q5SRE5 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.02□□□□□ -1.93
NUP188Q5SRE5 AL136964.1-201ENST00000622038 2990 ntBASIC3.02□□□□□ -1.93
NUP188Q5SRE5 LIG4-203ENST00000442234 3982 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NUP188Q5SRE5 RNA5SP456-201ENST00000364002 114 ntBASIC3.01□□□□□ -1.93
NUP188Q5SRE5 ATP6V1G3-203ENST00000367382 611 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NUP188Q5SRE5 XIST-201ENST00000416330 750 ntTSL 2 BASIC3.01□□□□□ -1.93
NUP188Q5SRE5 ZDHHC20P3-201ENST00000531576 336 ntBASIC3.01□□□□□ -1.93
NUP188Q5SRE5 AC067852.7-201ENST00000623270 535 ntBASIC3.01□□□□□ -1.93
NUP188Q5SRE5 MRPL42-202ENST00000393128 1983 ntAPPRIS ALT1 TSL 3 BASIC3.01□□□□□ -1.93
NUP188Q5SRE5 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
NUP188Q5SRE5 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC3□□□□□ -1.93
NUP188Q5SRE5 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3□□□□□ -1.93
NUP188Q5SRE5 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3□□□□□ -1.93
NUP188Q5SRE5 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
NUP188Q5SRE5 SNORA25.6-201ENST00000364121 118 ntBASIC3□□□□□ -1.93
NUP188Q5SRE5 ACTR3BP6-201ENST00000422332 1241 ntBASIC3□□□□□ -1.93
NUP188Q5SRE5 AC018634.1-201ENST00000437554 401 ntBASIC3□□□□□ -1.93
NUP188Q5SRE5 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3□□□□□ -1.93
NUP188Q5SRE5 AC092185.1-201ENST00000491371 97 ntBASIC3□□□□□ -1.93
NUP188Q5SRE5 RNU6-1334P-201ENST00000516032 105 ntBASIC3□□□□□ -1.93
NUP188Q5SRE5 HIGD1AP10-201ENST00000527837 282 ntBASIC3□□□□□ -1.93
NUP188Q5SRE5 AC093673.2-201ENST00000609674 331 ntBASIC3□□□□□ -1.93
NUP188Q5SRE5 BX664608.1-201ENST00000610519 487 ntBASIC3□□□□□ -1.93
NUP188Q5SRE5 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3□□□□□ -1.93
NUP188Q5SRE5 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3□□□□□ -1.93
NUP188Q5SRE5 AC004520.1-201ENST00000608362 1413 ntBASIC3□□□□□ -1.93
NUP188Q5SRE5 FRG1BP-201ENST00000278882 761 ntBASIC2.99□□□□□ -1.93
NUP188Q5SRE5 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC2.99□□□□□ -1.93
NUP188Q5SRE5 RNU6-328P-201ENST00000390887 106 ntBASIC2.99□□□□□ -1.93
NUP188Q5SRE5 NDUFB4P5-201ENST00000415445 361 ntBASIC2.99□□□□□ -1.93
NUP188Q5SRE5 AC234781.4-201ENST00000419384 244 ntBASIC2.99□□□□□ -1.93
NUP188Q5SRE5 AC245517.4-201ENST00000448601 281 ntBASIC2.99□□□□□ -1.93
NUP188Q5SRE5 AC087385.1-201ENST00000475062 312 ntBASIC2.99□□□□□ -1.93
NUP188Q5SRE5 AC135999.1-201ENST00000478962 479 ntBASIC2.99□□□□□ -1.93
NUP188Q5SRE5 AL024509.2-201ENST00000493462 493 ntBASIC2.99□□□□□ -1.93
NUP188Q5SRE5 AC008083.2-201ENST00000546707 476 ntBASIC2.99□□□□□ -1.93
NUP188Q5SRE5 AL160408.5-201ENST00000607759 526 ntTSL 4 BASIC2.99□□□□□ -1.93
NUP188Q5SRE5 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC2.99□□□□□ -1.93
NUP188Q5SRE5 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NUP188Q5SRE5 SNORA41-201ENST00000384675 132 ntBASIC2.99□□□□□ -1.93
NUP188Q5SRE5 NDUFA5P4-201ENST00000436704 385 ntBASIC2.99□□□□□ -1.93
NUP188Q5SRE5 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC2.99□□□□□ -1.93
NUP188Q5SRE5 GAPDHP27-201ENST00000447427 1020 ntBASIC2.99□□□□□ -1.93
NUP188Q5SRE5 MTCO3P11-201ENST00000455103 774 ntBASIC2.99□□□□□ -1.93
NUP188Q5SRE5 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.99□□□□□ -1.93
NUP188Q5SRE5 RPS27P27-201ENST00000498779 255 ntBASIC2.99□□□□□ -1.93
NUP188Q5SRE5 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC2.99□□□□□ -1.93
NUP188Q5SRE5 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.99□□□□□ -1.93
NUP188Q5SRE5 AC090819.1-201ENST00000523800 1111 ntBASIC2.99□□□□□ -1.93
NUP188Q5SRE5 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NUP188Q5SRE5 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC2.99□□□□□ -1.93
NUP188Q5SRE5 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
NUP188Q5SRE5 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.99□□□□□ -1.93
NUP188Q5SRE5 MTND5P29-201ENST00000458676 1807 ntBASIC2.98□□□□□ -1.93
NUP188Q5SRE5 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
NUP188Q5SRE5 ZNF260-203ENST00000588993 4174 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
NUP188Q5SRE5 RNA5SP239-201ENST00000410218 129 ntBASIC2.98□□□□□ -1.93
NUP188Q5SRE5 LINC01737-201ENST00000412647 403 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NUP188Q5SRE5 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
NUP188Q5SRE5 SDCBPP3-201ENST00000419629 891 ntBASIC2.98□□□□□ -1.93
NUP188Q5SRE5 MTCO2P17-201ENST00000424336 677 ntBASIC2.98□□□□□ -1.93
NUP188Q5SRE5 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.98□□□□□ -1.93
NUP188Q5SRE5 GSTA11P-201ENST00000452866 669 ntBASIC2.98□□□□□ -1.93
NUP188Q5SRE5 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC2.98□□□□□ -1.93
NUP188Q5SRE5 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.98□□□□□ -1.93
NUP188Q5SRE5 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.98□□□□□ -1.93
NUP188Q5SRE5 SNRPGP18-201ENST00000553000 214 ntBASIC2.98□□□□□ -1.93
NUP188Q5SRE5 AC128687.1-201ENST00000605304 619 ntBASIC2.98□□□□□ -1.93
NUP188Q5SRE5 AC107294.3-201ENST00000609211 526 ntBASIC2.98□□□□□ -1.93
NUP188Q5SRE5 CR589904.2-201ENST00000612533 440 ntBASIC2.98□□□□□ -1.93
NUP188Q5SRE5 MIR6766-201ENST00000622641 72 ntBASIC2.98□□□□□ -1.93
NUP188Q5SRE5 Z99496.1-201ENST00000469424 1477 ntBASIC2.98□□□□□ -1.93
NUP188Q5SRE5 AC097714.1-201ENST00000511272 1647 ntBASIC2.98□□□□□ -1.93
NUP188Q5SRE5 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
NUP188Q5SRE5 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC2.97□□□□□ -1.93
NUP188Q5SRE5 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NUP188Q5SRE5 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
NUP188Q5SRE5 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NUP188Q5SRE5 CASP3-203ENST00000393588 677 ntTSL 4 BASIC2.97□□□□□ -1.93
NUP188Q5SRE5 NPM1P49-201ENST00000448027 714 ntBASIC2.97□□□□□ -1.93
NUP188Q5SRE5 SNRPGP9-201ENST00000456025 225 ntBASIC2.97□□□□□ -1.93
NUP188Q5SRE5 ISCA1P3-201ENST00000577104 373 ntBASIC2.97□□□□□ -1.93
NUP188Q5SRE5 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC2.97□□□□□ -1.93
NUP188Q5SRE5 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC2.97□□□□□ -1.93
NUP188Q5SRE5 VN1R80P-201ENST00000597126 338 ntBASIC2.97□□□□□ -1.93
NUP188Q5SRE5 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC2.97□□□□□ -1.93
NUP188Q5SRE5 5S_rRNA.12-201ENST00000617631 107 ntBASIC2.97□□□□□ -1.93
NUP188Q5SRE5 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC2.97□□□□□ -1.93
NUP188Q5SRE5 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC2.97□□□□□ -1.93
NUP188Q5SRE5 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NUP188Q5SRE5 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NUP188Q5SRE5 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
NUP188Q5SRE5 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 88 ms