Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 MIR335-201ENST00000362173 94 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 RNU6-682P-201ENST00000363843 106 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 SNORD8-201ENST00000363915 110 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 Y_RNA.269-201ENST00000364685 89 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 Y_RNA.352-201ENST00000365439 102 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 AL603910.2-201ENST00000407268 136 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 AC096664.2-201ENST00000411843 406 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 Z99755.1-201ENST00000414048 380 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 RPL18P10-201ENST00000425606 538 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 AL359265.2-201ENST00000434367 631 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 AC073264.2-201ENST00000448886 166 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 AC005297.2-201ENST00000450430 606 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 HMGB3P21-201ENST00000452483 547 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 LINC01399-202ENST00000458450 244 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 AC026410.2-201ENST00000460281 156 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 AC087879.1-201ENST00000474343 374 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 RPL21P93-201ENST00000480465 489 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 RNU6-62P-201ENST00000516526 102 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 RNU6-897P-201ENST00000517135 105 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 AP006289.1-201ENST00000538089 277 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 AC002558.3-201ENST00000574021 401 ntTSL 3 BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 MIR4301-201ENST00000577203 66 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 AC011494.1-201ENST00000596454 237 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 AC064801.1-201ENST00000612025 407 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 AC015712.7-201ENST00000615211 635 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 AL365265.1-201ENST00000621045 234 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 SCEL-201ENST00000349847 2386 ntAPPRIS P4 TSL 1 (best) BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 AL137141.1-201ENST00000624622 4836 ntBASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC5.37□□□□□ -1.55
RSPO4Q2I0M5 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 ZNF765-201ENST00000396408 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 GABRB2-201ENST00000274547 7409 ntTSL 5 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 GTDC1-203ENST00000392867 2408 ntTSL 5 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 RNU6-1151P-201ENST00000384684 107 ntBASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 RNU6-1154P-201ENST00000391001 104 ntBASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 AL031679.1-201ENST00000400616 525 ntBASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 RNU2-25P-201ENST00000411041 191 ntBASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 PRUNEP1-201ENST00000425846 705 ntBASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 SNRPG-205ENST00000449935 428 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 AC245028.2-201ENST00000458673 253 ntBASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 RPL9P32-201ENST00000464118 620 ntBASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 PABPC1P3-201ENST00000469174 459 ntBASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 AL049830.2-201ENST00000480072 201 ntBASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 AC105758.1-201ENST00000506038 399 ntBASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 RNU7-200P-201ENST00000516105 62 ntBASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 MIR2117-201ENST00000516780 80 ntBASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 ASB8-204ENST00000536071 568 ntTSL 4 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 AC011477.5-201ENST00000586571 259 ntBASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 AL162431.4-201ENST00000604674 411 ntBASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 AC090525.3-201ENST00000605601 189 ntBASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 AC244100.1-202ENST00000621554 382 ntBASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 AL445363.3-201ENST00000623080 671 ntBASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 AC011155.2-201ENST00000623202 216 ntBASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 AC104461.1-201ENST00000637430 817 ntTSL 5 BASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 AL596275.2-208ENST00000641192 594 ntBASIC5.36□□□□□ -1.55
RSPO4Q2I0M5 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms