Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 LINC00507-201ENST00000540882 1935 ntTSL 5 BASIC4.93□□□□□ -1.62
YBX1P67809 MTND5P33-201ENST00000571250 1450 ntBASIC4.93□□□□□ -1.62
YBX1P67809 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.93□□□□□ -1.62
YBX1P67809 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC4.93□□□□□ -1.62
YBX1P67809 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
YBX1P67809 AP000756.2-201ENST00000624168 2567 ntBASIC4.93□□□□□ -1.62
YBX1P67809 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
YBX1P67809 PHKBP1-201ENST00000450951 1951 ntBASIC4.93□□□□□ -1.62
YBX1P67809 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
YBX1P67809 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
YBX1P67809 POT1-AS1-205ENST00000453342 3252 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
YBX1P67809 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
YBX1P67809 AP001350.1-201ENST00000601906 1524 ntBASIC4.92□□□□□ -1.62
YBX1P67809 MTND4P14-201ENST00000435799 1354 ntBASIC4.92□□□□□ -1.62
YBX1P67809 AP001803.2-201ENST00000532274 2034 ntTSL 2 BASIC4.92□□□□□ -1.62
YBX1P67809 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
YBX1P67809 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.92□□□□□ -1.62
YBX1P67809 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
YBX1P67809 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC4.92□□□□□ -1.62
YBX1P67809 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.92□□□□□ -1.62
YBX1P67809 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.92□□□□□ -1.62
YBX1P67809 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC4.92□□□□□ -1.62
YBX1P67809 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
YBX1P67809 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
YBX1P67809 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC4.92□□□□□ -1.62
YBX1P67809 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
YBX1P67809 AL645733.1-201ENST00000402250 217 ntBASIC4.92□□□□□ -1.62
YBX1P67809 RN7SKP213-201ENST00000410746 298 ntBASIC4.92□□□□□ -1.62
YBX1P67809 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC4.92□□□□□ -1.62
YBX1P67809 PRPF38AP2-201ENST00000438179 851 ntBASIC4.92□□□□□ -1.62
YBX1P67809 AC114495.1-201ENST00000441274 436 ntBASIC4.92□□□□□ -1.62
YBX1P67809 RPL32P28-201ENST00000443577 397 ntBASIC4.92□□□□□ -1.62
YBX1P67809 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.92□□□□□ -1.62
YBX1P67809 RPL10P17-201ENST00000453852 316 ntBASIC4.92□□□□□ -1.62
YBX1P67809 HMGB1P15-201ENST00000453854 435 ntBASIC4.92□□□□□ -1.62
YBX1P67809 DHFRP3-201ENST00000455595 559 ntBASIC4.92□□□□□ -1.62
YBX1P67809 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.92□□□□□ -1.62
YBX1P67809 RNU7-152P-201ENST00000458982 64 ntBASIC4.92□□□□□ -1.62
YBX1P67809 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC4.92□□□□□ -1.62
YBX1P67809 RPSAP50-201ENST00000481955 852 ntBASIC4.92□□□□□ -1.62
YBX1P67809 RAD51AP1P1-201ENST00000484195 1001 ntBASIC4.92□□□□□ -1.62
YBX1P67809 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC4.92□□□□□ -1.62
YBX1P67809 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC4.92□□□□□ -1.62
YBX1P67809 RNU6-273P-201ENST00000516937 96 ntBASIC4.92□□□□□ -1.62
YBX1P67809 RNU6-794P-201ENST00000517261 64 ntBASIC4.92□□□□□ -1.62
YBX1P67809 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
YBX1P67809 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
YBX1P67809 OR5B10P-201ENST00000532869 642 ntBASIC4.92□□□□□ -1.62
YBX1P67809 APOOP3-201ENST00000536787 586 ntBASIC4.92□□□□□ -1.62
YBX1P67809 AC004817.2-201ENST00000561794 651 ntBASIC4.92□□□□□ -1.62
YBX1P67809 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC4.92□□□□□ -1.62
YBX1P67809 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.92□□□□□ -1.62
YBX1P67809 GLUD1P4-201ENST00000590914 418 ntBASIC4.92□□□□□ -1.62
YBX1P67809 AC068790.3-201ENST00000602988 553 ntBASIC4.92□□□□□ -1.62
YBX1P67809 MIR6810-201ENST00000622701 70 ntBASIC4.92□□□□□ -1.62
YBX1P67809 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
YBX1P67809 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.92□□□□□ -1.62
YBX1P67809 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC4.92□□□□□ -1.62
YBX1P67809 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
YBX1P67809 MTND4P1-201ENST00000457501 1466 ntBASIC4.92□□□□□ -1.62
YBX1P67809 HSPA8P14-201ENST00000552265 1805 ntBASIC4.92□□□□□ -1.62
YBX1P67809 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
YBX1P67809 AC134882.1-201ENST00000603738 1676 ntBASIC4.92□□□□□ -1.62
YBX1P67809 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.92□□□□□ -1.62
YBX1P67809 ZNF429-209ENST00000618549 1889 ntTSL 5 BASIC4.92□□□□□ -1.62
YBX1P67809 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.92□□□□□ -1.62
YBX1P67809 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
YBX1P67809 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.91□□□□□ -1.62
YBX1P67809 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
YBX1P67809 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
YBX1P67809 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
YBX1P67809 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
YBX1P67809 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC4.91□□□□□ -1.62
YBX1P67809 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC4.91□□□□□ -1.62
YBX1P67809 DTNA-229ENST00000598142 2509 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
YBX1P67809 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
YBX1P67809 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
YBX1P67809 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
YBX1P67809 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
YBX1P67809 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
YBX1P67809 MED13-201ENST00000397786 10465 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
YBX1P67809 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.91□□□□□ -1.62
YBX1P67809 Y_RNA.187-201ENST00000363918 113 ntBASIC4.91□□□□□ -1.62
YBX1P67809 RNA5SP455-201ENST00000365190 119 ntBASIC4.91□□□□□ -1.62
YBX1P67809 Y_RNA.367-201ENST00000365544 101 ntBASIC4.91□□□□□ -1.62
YBX1P67809 SNORA56-201ENST00000383966 129 ntBASIC4.91□□□□□ -1.62
YBX1P67809 RNU6-38P-201ENST00000384085 107 ntBASIC4.91□□□□□ -1.62
YBX1P67809 AL035079.1-201ENST00000405210 287 ntBASIC4.91□□□□□ -1.62
YBX1P67809 MIR548F5-201ENST00000408421 86 ntBASIC4.91□□□□□ -1.62
YBX1P67809 AC009310.1-201ENST00000414414 451 ntBASIC4.91□□□□□ -1.62
YBX1P67809 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
YBX1P67809 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
YBX1P67809 AC092832.1-201ENST00000422934 400 ntBASIC4.91□□□□□ -1.62
YBX1P67809 AC005517.2-201ENST00000424673 553 ntBASIC4.91□□□□□ -1.62
YBX1P67809 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.91□□□□□ -1.62
YBX1P67809 AL591719.2-201ENST00000437400 386 ntTSL 3 BASIC4.91□□□□□ -1.62
YBX1P67809 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
YBX1P67809 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC4.91□□□□□ -1.62
YBX1P67809 CEACAMP7-201ENST00000444105 496 ntBASIC4.91□□□□□ -1.62
YBX1P67809 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms