Protein–RNA interactions for Protein: P26640

VARS, Valine--tRNA ligase, humanhuman

Known RBP Predictions only

Length 1,264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARSP26640 AL670379.1-201ENST00000604752 252 ntBASIC6.08□□□□□ -1.44
VARSP26640 AL670379.5-201ENST00000605253 252 ntBASIC6.08□□□□□ -1.44
VARSP26640 AL670379.8-201ENST00000605353 252 ntBASIC6.08□□□□□ -1.44
VARSP26640 AL670379.7-201ENST00000605823 252 ntBASIC6.08□□□□□ -1.44
VARSP26640 NANOGP3-201ENST00000605855 286 ntBASIC6.08□□□□□ -1.44
VARSP26640 AC002044.1-201ENST00000606707 158 ntBASIC6.08□□□□□ -1.44
VARSP26640 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
VARSP26640 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
VARSP26640 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
VARSP26640 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.08□□□□□ -1.44
VARSP26640 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.08□□□□□ -1.44
VARSP26640 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VARSP26640 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
VARSP26640 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
VARSP26640 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
VARSP26640 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VARSP26640 SCN1A-203ENST00000409050 5946 ntTSL 5 BASIC6.07□□□□□ -1.44
VARSP26640 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.07□□□□□ -1.44
VARSP26640 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
VARSP26640 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.07□□□□□ -1.44
VARSP26640 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
VARSP26640 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
VARSP26640 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
VARSP26640 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.07□□□□□ -1.44
VARSP26640 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VARSP26640 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VARSP26640 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
VARSP26640 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
VARSP26640 RNY1P16-201ENST00000363063 111 ntBASIC6.07□□□□□ -1.44
VARSP26640 RNU6-1284P-201ENST00000363701 100 ntBASIC6.07□□□□□ -1.44
VARSP26640 Y_RNA.183-201ENST00000363882 113 ntBASIC6.07□□□□□ -1.44
VARSP26640 Y_RNA.269-201ENST00000364685 89 ntBASIC6.07□□□□□ -1.44
VARSP26640 Y_RNA.352-201ENST00000365439 102 ntBASIC6.07□□□□□ -1.44
VARSP26640 RNA5SP279-201ENST00000365513 117 ntBASIC6.07□□□□□ -1.44
VARSP26640 RNU6-611P-201ENST00000384276 104 ntBASIC6.07□□□□□ -1.44
VARSP26640 RNU6-1081P-201ENST00000384537 107 ntBASIC6.07□□□□□ -1.44
VARSP26640 MIR433-201ENST00000384837 93 ntBASIC6.07□□□□□ -1.44
VARSP26640 SNORD58.1-201ENST00000391313 66 ntBASIC6.07□□□□□ -1.44
VARSP26640 AL157702.1-201ENST00000398764 426 ntBASIC6.07□□□□□ -1.44
VARSP26640 RNA5SP178-201ENST00000410380 128 ntBASIC6.07□□□□□ -1.44
VARSP26640 RNU6-1140P-201ENST00000410517 106 ntBASIC6.07□□□□□ -1.44
VARSP26640 AL139156.1-201ENST00000412785 841 ntBASIC6.07□□□□□ -1.44
VARSP26640 AC096920.1-201ENST00000423991 241 ntBASIC6.07□□□□□ -1.44
VARSP26640 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.07□□□□□ -1.44
VARSP26640 GAPDHP59-201ENST00000435908 267 ntBASIC6.07□□□□□ -1.44
VARSP26640 RPL35AP22-201ENST00000436855 335 ntBASIC6.07□□□□□ -1.44
VARSP26640 CYCSP51-201ENST00000443545 318 ntBASIC6.07□□□□□ -1.44
VARSP26640 PPIAP3-201ENST00000450588 505 ntBASIC6.07□□□□□ -1.44
VARSP26640 Y_RNA.644-201ENST00000459006 113 ntBASIC6.07□□□□□ -1.44
VARSP26640 AC090602.1-201ENST00000469695 252 ntBASIC6.07□□□□□ -1.44
VARSP26640 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC6.07□□□□□ -1.44
VARSP26640 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC6.07□□□□□ -1.44
VARSP26640 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.07□□□□□ -1.44
VARSP26640 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC6.07□□□□□ -1.44
VARSP26640 Y_RNA.674-201ENST00000516362 113 ntBASIC6.07□□□□□ -1.44
VARSP26640 AC144568.1-201ENST00000520139 137 ntBASIC6.07□□□□□ -1.44
VARSP26640 IGHV4-55-201ENST00000520889 368 ntBASIC6.07□□□□□ -1.44
VARSP26640 CBX3P8-201ENST00000532412 525 ntBASIC6.07□□□□□ -1.44
VARSP26640 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.07□□□□□ -1.44
VARSP26640 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.07□□□□□ -1.44
VARSP26640 RN7SL261P-201ENST00000613441 282 ntBASIC6.07□□□□□ -1.44
VARSP26640 MIR7159-201ENST00000620587 66 ntBASIC6.07□□□□□ -1.44
VARSP26640 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC6.07□□□□□ -1.44
VARSP26640 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC6.07□□□□□ -1.44
VARSP26640 AL450472.1-202ENST00000637286 180 ntBASIC6.07□□□□□ -1.44
VARSP26640 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
VARSP26640 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VARSP26640 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VARSP26640 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VARSP26640 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
VARSP26640 CLEC4D-201ENST00000299665 1936 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
VARSP26640 FMN1-212ENST00000616417 13529 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
VARSP26640 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
VARSP26640 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
VARSP26640 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VARSP26640 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VARSP26640 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.06□□□□□ -1.44
VARSP26640 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VARSP26640 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
VARSP26640 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
VARSP26640 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
VARSP26640 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.06□□□□□ -1.44
VARSP26640 AP001541.1-201ENST00000623322 1904 ntBASIC6.06□□□□□ -1.44
VARSP26640 RN7SKP275-201ENST00000364626 301 ntBASIC6.06□□□□□ -1.44
VARSP26640 Y_RNA.277-201ENST00000364754 102 ntBASIC6.06□□□□□ -1.44
VARSP26640 AC005522.1-201ENST00000395416 346 ntBASIC6.06□□□□□ -1.44
VARSP26640 RNU6-174P-201ENST00000410406 106 ntBASIC6.06□□□□□ -1.44
VARSP26640 AC016769.2-201ENST00000414815 475 ntBASIC6.06□□□□□ -1.44
VARSP26640 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC6.06□□□□□ -1.44
VARSP26640 LINC01435-201ENST00000425050 722 ntTSL 3 BASIC6.06□□□□□ -1.44
VARSP26640 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC6.06□□□□□ -1.44
VARSP26640 EZH2P1-201ENST00000431167 291 ntBASIC6.06□□□□□ -1.44
VARSP26640 CEACAMP6-201ENST00000452007 574 ntBASIC6.06□□□□□ -1.44
VARSP26640 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.06□□□□□ -1.44
VARSP26640 RN7SL643P-201ENST00000471845 291 ntBASIC6.06□□□□□ -1.44
VARSP26640 CDH12P4-201ENST00000517835 295 ntBASIC6.06□□□□□ -1.44
VARSP26640 CDH12P3-201ENST00000517935 295 ntBASIC6.06□□□□□ -1.44
VARSP26640 CDH12P1-201ENST00000518435 295 ntBASIC6.06□□□□□ -1.44
VARSP26640 ODF1-202ENST00000518835 368 ntTSL 3 BASIC6.06□□□□□ -1.44
VARSP26640 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms